PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp7g21770 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | WRKY | ||||||||
Protein Properties | Length: 280aa MW: 30846.5 Da PI: 4.7857 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 48.4 | 1.9e-15 | 130 | 173 | 19 | 59 |
SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 rsYYrCt++ +C+++k v+rs++dp v+e+tY+g+H+++ Tp7g21770 130 AKKRSYYRCTHRstqNCWATKLVQRSDSDPAVFEVTYRGTHTCS 173 567********9999***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 1.6E-14 | 118 | 174 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.059 | 129 | 170 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 3.7E-14 | 130 | 174 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.0E-14 | 130 | 172 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.15E-13 | 130 | 173 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0010150 | Biological Process | leaf senescence | ||||
GO:0010193 | Biological Process | response to ozone | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0031347 | Biological Process | regulation of defense response | ||||
GO:0042542 | Biological Process | response to hydrogen peroxide | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence Send to blast |
MEGKKDMLSW EQKILLSELV LGLEATKKLQ TRLGESSSPP SSSSSSPVAE TNEVLLKQIL 60 SSYEKSLLML NWSSSPSVQL IPAAVAVVPV INSGGVPESP ASINGSPRSE EFFDGGGSSE 120 SHRQDHIFNA KKRSYYRCTH RSTQNCWATK LVQRSDSDPA VFEVTYRGTH TCSQAIAPPP 180 PPPASPEKRD TRPKPPTAQK PNEILESLKT SLTVRTDGLD DGDDFFSFPN TLPFYDYGTI 240 NSDFGGHMEC SPIFDVVDWF NPTVEMDTAF PTFLPDSIYY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:20409006). May regulate the early events of leaf senescence (PubMed:17369373, PubMed:20409006). Negatively regulates the expression of ESR/ESP (PubMed:20409006). Together with WRKY46 and WRKY70, promotes resistance to P.syringae, probably by enhancing salicylic acid (SA)- dependent genes. Contributes to the suppression of jasmonic acid (MeJA)-induced expression of PDF1.2 (PubMed:22325892). {ECO:0000269|PubMed:17369373, ECO:0000269|PubMed:20409006, ECO:0000269|PubMed:22325892}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp7g21770 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid (SA) (PubMed:22268143, PubMed:22325892). Strong accumulation during leaf senescence (PubMed:22268143). Down-regulated by jasmonate. Triggered by P.syringae (PubMed:22325892). {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11506370, ECO:0000269|PubMed:17369373, ECO:0000269|PubMed:22268143, ECO:0000269|PubMed:22325892}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006413515.1 | 1e-141 | probable WRKY transcription factor 53 | ||||
Swissprot | Q9SUP6 | 1e-127 | WRK53_ARATH; Probable WRKY transcription factor 53 | ||||
TrEMBL | V4MPJ6 | 1e-140 | V4MPJ6_EUTSA; Uncharacterized protein | ||||
STRING | XP_006413515.1 | 1e-141 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1933 | 27 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 1e-110 | WRKY family protein |