PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp7g15580
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family ERF
Protein Properties Length: 308aa    MW: 35054.7 Da    PI: 5.1895
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp7g15580genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-18110160255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrd + ng   r++lg+f taeeAa a+++a+ +++g
  Tp7g15580 110 KYRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFQTAEEAAMAYDKAAVRIRG 160
                8********.**********44465..**********************99997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.7E-29109169IPR001471AP2/ERF domain
PROSITE profilePS5103222.642110169IPR001471AP2/ERF domain
SMARTSM003802.5E-35110175IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-20110170IPR016177DNA-binding domain
CDDcd000186.86E-29110169No hitNo description
PfamPF008474.7E-12110160IPR001471AP2/ERF domain
PRINTSPR003677.1E-11111122IPR001471AP2/ERF domain
PRINTSPR003677.1E-11134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MAFGNIQEPD GEILKNVWAN FIRKPEIDKS SVHVPEISRT WEVLPVLDDG VPKEFKEKLL  60
PSLDMAMEAK EWTEILEATA SFPNETHHEP LTNPTGSRSL SFPVSCETRK YRGVRRRPWG  120
KFAAEIRDST RNGVRVWLGT FQTAEEAAMA YDKAAVRIRG IQRAHTNFQL DTVIKAIEMD  180
CGPSYYPVNR SSTSQSLRNH REIGLRTGKE MIRAYDNKVV DGMLENSCAL SYCSTQEYLE  240
ICGLRGKEET LLGSGKRQRR DGDCMFQEVE TNEMKKMVAG EDQLCDVFGL FEFEDLGSDY  300
LDRLLSSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-24109170161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp7g15580
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013670492.11e-170ethylene-responsive transcription factor ERF091-like
SwissprotO495151e-157ERF91_ARATH; Ethylene-responsive transcription factor ERF091
TrEMBLA0A398AK231e-169A0A398AK23_BRACM; Uncharacterized protein
STRINGBra013310.1-P1e-162(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-148ERF family protein