PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp5g35190
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family ERF
Protein Properties Length: 275aa    MW: 30948.8 Da    PI: 9.4048
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp5g35190genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.4e-21132181255
        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                gy+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+ +l+g
  Tp5g35190 132 GYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAAMRLRG 181
                8********.**********32....25*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.24E-21132189IPR016177DNA-binding domain
SMARTSM003801.6E-31132197IPR001471AP2/ERF domain
PROSITE profilePS5103222.827132189IPR001471AP2/ERF domain
PfamPF008475.3E-15132181IPR001471AP2/ERF domain
PRINTSPR003671.1E-10133144IPR001471AP2/ERF domain
CDDcd000181.82E-17133188No hitNo description
Gene3DG3DSA:3.30.730.106.7E-29133188IPR001471AP2/ERF domain
PRINTSPR003671.1E-10155171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MENTVDGHRL HLSIPLSSAV ETHQSVETYG FYKETPSVCM PFFEAKTPFS NLTVAEPFNG  60
HDSFDISSLI FSHDPNPVPV SPRRVMDDSI AAVVGENVLF GNNNNKVFDH FTATQTEDGV  120
KRWRKMPQKN GGYRGVRKRP WGRWSAEIRD RIGRCRHWLG TFDTAEEAAR AYDAAAMRLR  180
GTKAKTNFVV PTVFPEEVAQ TQSSTTEEDR RRKKKQRVNV RKCVKVTSVA QLFSDTTSTL  240
TSSSNDGNVI SPSDNLEKMG LELDLKLGLG LFRNY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-17124188671Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210216RRKKKQR
2211221RKKKQRVNVRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp5g35190
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022553817.11e-156ethylene-responsive transcription factor ERF084-like
SwissprotQ9M8M53e-87ERF84_ARATH; Ethylene-responsive transcription factor ERF084
TrEMBLA0A078HPH51e-154A0A078HPH5_BRANA; BnaC02g22960D protein
STRINGBra008460.1-P1e-135(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-80ERF family protein