PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp2g01540 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 21625.7 Da PI: 7.1813 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.5e-18 | 30 | 80 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+G+rw+ g+W eIr+p++ +kr++lg++ t+e+Aa a++ a+++l+ge Tp2g01540 30 SKYRGIRWRG--GKWITEIRVPKK---NKRIWLGTYPTPEMAATAYDVAALALKGE 80 89******86..*********976...4*************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 9.15E-19 | 30 | 89 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 1.77E-27 | 30 | 89 | No hit | No description |
Pfam | PF00847 | 2.2E-11 | 30 | 80 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.2E-27 | 31 | 93 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-25 | 31 | 88 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.047 | 31 | 87 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-6 | 32 | 43 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-6 | 69 | 89 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MPSRSYPCVS SSTTITTANN TLVSSGSAIS KYRGIRWRGG KWITEIRVPK KNKRIWLGTY 60 PTPEMAATAY DVAALALKGE EAALNFPSSV PSYPLPCSNS ETHIRKAAAT AAAAAAPVAV 120 AAAAVVVVKT AKNMNGGEKN KEGVCDVVGY STNEFVDEEE LFNMPNLLVY MARGMMVAPP 180 WIDSLSLDDS PEISIGESLW SY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp2g01540 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018454835.1 | 6e-58 | PREDICTED: ethylene-responsive transcription factor ERF026-like | ||||
Swissprot | Q9CAN9 | 3e-48 | ERF26_ARATH; Ethylene-responsive transcription factor ERF026 | ||||
TrEMBL | A0A087HEJ5 | 3e-55 | A0A087HEJ5_ARAAL; Uncharacterized protein | ||||
STRING | A0A087HEJ5 | 5e-56 | (Arabis alpina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1957 | 27 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12630.1 | 6e-31 | ERF family protein |