PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010558116.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

BES1

Protein Properties

Length: 273aa MW: 29382.9 Da PI: 10.274

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010558116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	214.6	2.4e-66	9	150	1	145
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 +++gr+ptwkErEnnkrRERrRRa+aaki+aGLRaqGn+klpk++DnneVlkALc eAGw+vedDGttyrkg++p++++ ++ + ++s +ss+q XP_010558116.1 9 AAAGRTPTWKERENNKRRERRRRAVAAKIFAGLRAQGNFKLPKHCDNNEVLKALCSEAGWIVEDDGTTYRKGCRPKQAEGTGATPPRVSACSSVQ 103 589***********************************************************************77778888899**** PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlsl 145 s++ss+++spv+sy+asp+sss+psp++++ +++a l+p+l++l++ XP_010558116.1 104 PSPQSSSFPSPVPSYNASPASSSYPSPTRFEPNPSA---YLIPYLRTLAS 150 ******************************9885...88888888765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.6E-63	11	134	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence Send to blast
MTAAGEGGAA AGRTPTWKER ENNKRRERRR RAVAAKIFAG LRAQGNFKLP KHCDNNEVLK 60 ALCSEAGWIV EDDGTTYRKG CRPKQAEGTG ATPPRVSACS SVQPSPQSSS FPSPVPSYNA 120 SPASSSYPSP TRFEPNPSAY LIPYLRTLAS SRNLPPLRVS NSAPVTPPLS SPRGSTPKVL 180 PRWRISNFAV SAPSSPTRRL NRTAIPECDE SDVSTVDSGR WFCFQAPSGP PSPTFNLVNK 240 SGGDSVKPWE GEKIHEVAVD DLELTLGNPK ARG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	7e-26	13	92	372	451	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	7e-26	13	92	372	451	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	7e-26	13	92	372	451	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	7e-26	13	92	372	451	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010558116.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010558116.1	0.0	PREDICTED: BES1/BZR1 homolog protein 1
Swissprot	Q9S7F3	1e-104	BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBL	V4LNV8	1e-111	V4LNV8_EUTSA; Uncharacterized protein
STRING	XP_010558116.1	0.0	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM14467	17	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50750.1	5e-91	BES1/BZR1 homolog 1