PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010556073.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | ERF | ||||||||
Protein Properties | Length: 198aa MW: 22089.8 Da PI: 7.9623 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.9 | 9.3e-17 | 7 | 54 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 +y+GVr+++ +g+Wv+eIr+p +r++lg+f +ae+Aa+ +++a++ + XP_010556073.1 7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFESAEDAARTYDEAARLM 54 69******9.**********8.....334*********************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.27E-29 | 6 | 67 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.0E-29 | 7 | 65 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.3E-10 | 7 | 55 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.5E-34 | 7 | 71 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.073 | 7 | 65 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.94E-17 | 7 | 66 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 5.5E-10 | 8 | 19 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.5E-10 | 30 | 46 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence Send to blast |
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFESA EDAARTYDEA ARLMCGTGTP 60 RTNFPYNPNA PQDSSSKILS STLTAKLHKC YKASLQTSKL TQTQTARLLP PPPPRTPFRQ 120 TLQKPAESDG ANCENVGVCA SASASDANAE GTNWGVENVI LQQQLKPLEE DQIEQMIEEL 180 LHYGSVEVMS SESSSSKW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010556073.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010556073.1 | 1e-147 | PREDICTED: ethylene-responsive transcription factor ERF003-like | ||||
Swissprot | Q94AW5 | 2e-68 | ERF03_ARATH; Ethylene-responsive transcription factor ERF003 | ||||
TrEMBL | A0A1J7H7R5 | 1e-71 | A0A1J7H7R5_LUPAN; Uncharacterized protein | ||||
STRING | XP_010556073.1 | 1e-147 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 5e-66 | ERF family protein |
Publications ? help Back to Top | |||
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