PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010556073.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 198aa    MW: 22089.8 Da    PI: 7.9623
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010556073.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.99.3e-17754253
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    +y+GVr+++ +g+Wv+eIr+p        +r++lg+f +ae+Aa+ +++a++ +
  XP_010556073.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFESAEDAARTYDEAARLM 54
                    69******9.**********8.....334*********************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.27E-29667No hitNo description
Gene3DG3DSA:3.30.730.101.0E-29765IPR001471AP2/ERF domain
PfamPF008477.3E-10755IPR001471AP2/ERF domain
SMARTSM003801.5E-34771IPR001471AP2/ERF domain
PROSITE profilePS5103220.073765IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-17766IPR016177DNA-binding domain
PRINTSPR003675.5E-10819IPR001471AP2/ERF domain
PRINTSPR003675.5E-103046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFESA EDAARTYDEA ARLMCGTGTP  60
RTNFPYNPNA PQDSSSKILS STLTAKLHKC YKASLQTSKL TQTQTARLLP PPPPRTPFRQ  120
TLQKPAESDG ANCENVGVCA SASASDANAE GTNWGVENVI LQQQLKPLEE DQIEQMIEEL  180
LHYGSVEVMS SESSSSKW
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010556073.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010556073.11e-147PREDICTED: ethylene-responsive transcription factor ERF003-like
SwissprotQ94AW52e-68ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A1J7H7R51e-71A0A1J7H7R5_LUPAN; Uncharacterized protein
STRINGXP_010556073.11e-147(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.15e-66ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]