PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010554971.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 444aa    MW: 48456 Da    PI: 8.3458
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010554971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-1851100255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp++   + r +lg+f+taeeAa a+++a++ l+g
  XP_010554971.1  51 RYRGVRRRP-WGRYAAEIRDPTS---KERRWLGTFDTAEEAACAYDHAARTLRG 100
                     8********.**********854...4999*********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.76E-2850107No hitNo description
PfamPF008476.0E-1051100IPR001471AP2/ERF domain
PROSITE profilePS5103222.27351108IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-2851108IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-2151109IPR016177DNA-binding domain
SMARTSM003801.3E-3251114IPR001471AP2/ERF domain
PRINTSPR003672.8E-95263IPR001471AP2/ERF domain
PRINTSPR003672.8E-97490IPR001471AP2/ERF domain
SuperFamilySSF1014471.36E-5249259No hitNo description
PfamPF015544.7E-25317438IPR002528Multi antimicrobial extrusion protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006855Biological Processdrug transmembrane transport
GO:0009735Biological Processresponse to cytokinin
GO:0009880Biological Processembryonic pattern specification
GO:0010084Biological Processspecification of organ axis polarity
GO:0048825Biological Processcotyledon development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0015238Molecular Functiondrug transmembrane transporter activity
GO:0015297Molecular Functionantiporter activity
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MEEAMRNLNG YTHEPSPNPS PRKSTSTPSA VANRRRLSSA VSSATDPATK RYRGVRRRPW  60
GRYAAEIRDP TSKERRWLGT FDTAEEAACA YDHAARTLRG FKARTNFTYP TAADVPEPGF  120
TFSGKRSRPF VPSTSHFTAG FYGAPAPQRI APSPDKFLLR DVFNATTIDA SCSSRRTPPC  180
SSLPNPDGSK LPAVFLPVFE SKTACMSTSV DEGDVEFFPR EPSDSGLLQE IVQGFLKSRN  240
RQLSDNLPPP PPPPPPPPPV TLQEYPGNIV SFGAYHHVNS LPETMITNEN LAEYGNFQAN  300
DSGVPACKGG FMSGNDLEIW YFMALVLFAG YLKNAEVSVA ALSICMNILG WAAMVAIGFN  360
AAVSVRVSNE LGANHPRTAK FSLVVAVISS TMIGVGISAV LLIFRERYPE FFTDDKEVRT  420
VVRDLTPMLA LSIVINNAQP DIVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-19511091473Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010554971.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010556402.11e-113PREDICTED: ethylene-responsive transcription factor ESR1
STRINGXP_010554971.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.18e-48ERF family protein