PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010550368.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family Nin-like
Protein Properties Length: 196aa    MW: 22764.3 Da    PI: 9.0036
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010550368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.34.9e-2671120352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     k ++ e +s+yF++pi++AA+eL+++lT+LK++CR++GI+RWPhRk+ sl
  XP_010550368.1  71 KMLTREIISRYFYMPITQAARELNIGLTLLKKRCRELGIRRWPHRKLMSL 120
                     78999******************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.30249142IPR003035RWP-RK domain
PfamPF020423.2E-2173120IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051302Biological Processregulation of cell division
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MLGCDVDLTG YPAEPYGDEL SVLFQEHNKE EDGCVLEKIE ENMRKESAKT RKISKRCKDD  60
TDSTNICPVS KMLTREIISR YFYMPITQAA RELNIGLTLL KKRCRELGIR RWPHRKLMSL  120
QTLISNVQEL GKMEGEENGG KLRNAVEILE KEKKKIEELP DMEFEDKTKR LRQACFKANY  180
KRKRLMSSAS SSSSFF
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010550368.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010550368.11e-143PREDICTED: protein RKD1-like
SwissprotQ9M9U95e-66RKD1_ARATH; Protein RKD1
TrEMBLA0A061FXS18e-64A0A061FXS1_THECC; RWP-RK domain-containing protein, putative
STRINGXP_010550368.11e-143(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM39662356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.13e-60RWP-RK domain-containing protein