PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010550368.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | Nin-like | ||||||||
Protein Properties | Length: 196aa MW: 22764.3 Da PI: 9.0036 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 82.3 | 4.9e-26 | 71 | 120 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k ++ e +s+yF++pi++AA+eL+++lT+LK++CR++GI+RWPhRk+ sl XP_010550368.1 71 KMLTREIISRYFYMPITQAARELNIGLTLLKKRCRELGIRRWPHRKLMSL 120 78999******************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.302 | 49 | 142 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 3.2E-21 | 73 | 120 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MLGCDVDLTG YPAEPYGDEL SVLFQEHNKE EDGCVLEKIE ENMRKESAKT RKISKRCKDD 60 TDSTNICPVS KMLTREIISR YFYMPITQAA RELNIGLTLL KKRCRELGIR RWPHRKLMSL 120 QTLISNVQEL GKMEGEENGG KLRNAVEILE KEKKKIEELP DMEFEDKTKR LRQACFKANY 180 KRKRLMSSAS SSSSFF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010550368.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010550368.1 | 1e-143 | PREDICTED: protein RKD1-like | ||||
Swissprot | Q9M9U9 | 5e-66 | RKD1_ARATH; Protein RKD1 | ||||
TrEMBL | A0A061FXS1 | 8e-64 | A0A061FXS1_THECC; RWP-RK domain-containing protein, putative | ||||
STRING | XP_010550368.1 | 1e-143 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3966 | 23 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 3e-60 | RWP-RK domain-containing protein |