PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010548885.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 379aa    MW: 42574.4 Da    PI: 8.8477
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010548885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.72.5e-082442901763
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     A+rsR RK+++i+eLe+ v++L+ae ++   el+ l+++   l +e+
  XP_010548885.1 244 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELDFLNQQNLILSMEN 290
                     89***********************************9998887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0036235292IPR004827Basic-leucine zipper domain
CDDcd147031.77E-14239283No hitNo description
Gene3DG3DSA:1.20.5.1707.6E-6244286No hitNo description
SuperFamilySSF579594.9E-6244286No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MATSKQSQNV RNLIYPGKHA LLPPKIPFPS VSASYAEYIP SEFNGSKPVR KPREGKGHHQ  60
RTSSESYLTE EQPSWLDDLL DEPETPASRS GHRRSSSDSF AYLDAVNASN VSLTLNDFKY  120
RSVVPAPQRG IQKFDRSQKA QDASLYSDAG FVKQDNRLWN NLIASGAHPG LLPSTRESIG  180
RQNIGALAMS QEEDTVTCSP AETKNSAESL SHNLNKVSPE RRIPNPFPVI SEADNTKHSK  240
QQFAQRSRVR KLQYIAELER NVQALQAEGS EVSAELDFLN QQNLILSMEN KSLKQRLESL  300
AHEKLIKHLE QEVLEREIGR LRRALYQPQQ EQELPQKPLT NHRRATSKDL DSQFANLSLK  360
SNDLSATHDS TSTTGQFHV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010548885.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010548885.10.0PREDICTED: uncharacterized protein At4g06598 isoform X2
TrEMBLD7KY871e-162D7KY87_ARALL; Predicted protein
STRINGXP_010548883.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-153bZIP family protein