PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010546410.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family EIL
Protein Properties Length: 463aa    MW: 53226 Da    PI: 5.0844
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010546410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3403.82.1e-123353681353
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     ++lkkrmwkd+ l+++ k++k+       +   a    ++ e++rrkkm+raQD++LkYM+k+me c+a+GfvYgi+pekg+ v g+sdsLr+WW
  XP_010546410.1  35 DDLKKRMWKDRLLMRKFKQQKRVDA----V--AA--AARRPEASRRKKMARAQDSVLKYMMKIMEECKARGFVYGIVPEKGRAVIGSSDSLRRWW 121
                     79*************8888888632....2..22..24789****************************************************** PP

                     XXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT-- CS
            EIN3  96 kekvefdrngpaaisky...qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgls 187
                     ke+++f+r++p+ai++y   +a++l++s +++   + +s+ h+l+elqDTtlgSLLsalmqhc ppqr+fpl+kg++pPWWPtG+e wwge+g  
  XP_010546410.1 122 KENIQFNRTAPTAICDYltlAAEQLLFSADQDA--DVKSYMHMLHELQDTTLGSLLSALMQHCAPPQRQFPLDKGIAPPWWPTGSEIWWGEQGSG 214
                     ****************************98888..67********************************************************** PP

                     TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3 188 kdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqke 282
                     ++ ++ppy+kphdl+k+wkvsvLtavikhmsp++e++r+l+rqsk+lqdkm+ake+++l++vlnqe+++  ++          ++ + +s+++++
  XP_010546410.1 215 HELEAPPYRKPHDLRKVWKVSVLTAVIKHMSPNLERVRRLVRQSKCLQDKMMAKETDTLSRVLNQEDALR-QL---------TEKCLEISDDKEQ 299
                     ******************************************************************8743.22.........3445566666555 PP

                     XXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
            EIN3 283 dvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                     d+e       ++  ++k+  ++++   ++k   +++  + +  +  cq+ ++ +se  l+f dkns+++++
  XP_010546410.1 300 DQE--PCFVGSSTGKDKQVVQEQTGGNKRKVDFRREEGEGSTSCDACQNPNCLHSEKGLGFVDKNSRTDHQ 368
                     555..4444444555555555555544444555555555555789************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.3E-11335281No hitNo description
Gene3DG3DSA:1.10.3180.109.7E-66156285IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.4E-57160284IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MVEFEELEPL SPIKDDESDK DDEGQDLAGE EISYDDLKKR MWKDRLLMRK FKQQKRVDAV  60
AAAARRPEAS RRKKMARAQD SVLKYMMKIM EECKARGFVY GIVPEKGRAV IGSSDSLRRW  120
WKENIQFNRT APTAICDYLT LAAEQLLFSA DQDADVKSYM HMLHELQDTT LGSLLSALMQ  180
HCAPPQRQFP LDKGIAPPWW PTGSEIWWGE QGSGHELEAP PYRKPHDLRK VWKVSVLTAV  240
IKHMSPNLER VRRLVRQSKC LQDKMMAKET DTLSRVLNQE DALRQLTEKC LEISDDKEQD  300
QEPCFVGSST GKDKQVVQEQ TGGNKRKVDF RREEGEGSTS CDACQNPNCL HSEKGLGFVD  360
KNSRTDHQLQ CLYSNFAREP VRNMGDLDQS LETLVPPLTQ DYLWSEKMND LNDQKEIEDV  420
LAMDAAFKKG NAESNVTQFQ EDRYSNHTNE AFSVWDMGYE EID
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-541582831126Protein ETHYLENE INSENSITIVE 3
4zds_B4e-541582831126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010546410.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010546410.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9LX161e-160EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLD7M2T81e-165D7M2T8_ARALL; Ethylene insensitive 3 family protein
STRINGXP_010546410.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58792747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-152EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]