PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010543605.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 329aa    MW: 37257.8 Da    PI: 8.8087
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010543605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.11.4e-062072431753
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                     A r R+R++++i eLe+ v++L+ae +++   +  l 
  XP_010543605.1 207 AHRARLRRLQYISELERNVQVLQAEGSEMSTAIHYLD 243
                     899**********************999987776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0028196255IPR004827Basic-leucine zipper domain
CDDcd147031.04E-10200245No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-6207250No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MENPGSLSNV GSFALMGKQS VLPPRNPSRC ISPSASEYIP GSSLESHDLF KSMENSVNHH  60
HSSPDKLLAD EQPAWLDDLL SEPESPIMSK GHRRSASDTA TFLNFASMSF GEETQLRSHF  120
GGPFCLFQSI DRHDDVWRPN SSGKHQDRGW QLPNKNGANL KKSASCSAVN KIGTLAPKSV  180
QRQVRELKEG APVKVDNDSK RAKQQNAHRA RLRRLQYISE LERNVQVLQA EGSEMSTAIH  240
YLDQQLMMLS MENRALKQRL DSLAEIQKLK QTEQHLLERE IGKLRFLRLQ QQQQQQQQPE  300
PQILQQNQYN LYHTSTSREL ESQVAALSI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010543605.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010543612.10.0PREDICTED: uncharacterized protein At4g06598
RefseqXP_010543620.10.0PREDICTED: uncharacterized protein At4g06598
TrEMBLA0A397YD701e-109A0A397YD70_BRACM; Uncharacterized protein
STRINGXP_010543605.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1493322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.23e-48bZIP family protein