PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010542934.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 143aa    MW: 15629.8 Da    PI: 7.7477
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010542934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.1e-211162155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr+++ +g+++AeIrd ++ g   r++lg+f+taeeAa+a+++a+ +++g
  XP_010542934.1 11 TKYRGVRRRP-WGKYAAEIRDSRKHG--ERVWLGTFDTAEEAARAYDRAAFSMRG 62
                    69********.**********65443..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.6E-161162IPR001471AP2/ERF domain
CDDcd000183.03E-291171No hitNo description
Gene3DG3DSA:3.30.730.102.8E-321272IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-241272IPR016177DNA-binding domain
SMARTSM003803.3E-361276IPR001471AP2/ERF domain
PROSITE profilePS5103224.3811270IPR001471AP2/ERF domain
PRINTSPR003675.2E-121324IPR001471AP2/ERF domain
PRINTSPR003675.2E-123652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009789Biological Processpositive regulation of abscisic acid-activated signaling pathway
GO:0010186Biological Processpositive regulation of cellular defense response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0090332Biological Processstomatal closure
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MDGGGGGDQG TKYRGVRRRP WGKYAAEIRD SRKHGERVWL GTFDTAEEAA RAYDRAAFSM  60
RGRAAILNFP HEYNLATSGD SGNYHPSSAS AAASVSAAAS SSSSSSRQVF EFEYLDDSVL  120
EQLLEYGENY DKNSSNNSKG RKQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-4711191114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269|PubMed:11950980}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00029PBMTransfer from AT5G43410Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010542934.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by Pseudomonas syringae tomato (both virulent and avirulent avrRpt2 strains). Not affected by methyl jasmonate (MeJA), ethylene or salicylic acid (SA). {ECO:0000269|PubMed:11950980}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010542934.11e-101PREDICTED: ethylene-responsive transcription factor 14
SwissprotP938225e-47ERF97_ARATH; Ethylene-responsive transcription factor 14
TrEMBLA0A078H4Y59e-51A0A078H4Y5_BRANA; BnaA09g16520D protein
TrEMBLA0A078IN681e-50A0A078IN68_BRANA; BnaC09g17590D protein
TrEMBLA0A397XUP19e-51A0A397XUP1_BRACM; Uncharacterized protein
TrEMBLA0A3P6EFT91e-50A0A3P6EFT9_BRAOL; Uncharacterized protein
TrEMBLM4EFD19e-51M4EFD1_BRARP; Uncharacterized protein
STRINGXP_010542934.11e-100(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.11e-44Ethylene-responsive element binding factor 14