PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010542864.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 417aa    MW: 45200 Da    PI: 5.3209
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010542864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.78.1e-16199253357
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                     ++kr+rr+ +NRe+ArrsR+RK++++ eLe+ v +L  e ++L k+l+  + +++
  XP_010542864.1 199 DVKRARRMLSNRESARRSRRRKQEQMSELETQVSQLNVEHSSLLKQLSDVNHKYD 253
                     78******************************************99998887766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.9E-19197261IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.358199254IPR004827Basic-leucine zipper domain
PfamPF001709.8E-15199253IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-12201251No hitNo description
SuperFamilySSF579591.85E-11201251No hitNo description
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
PfamPF124989.4E-15268325IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002240Biological Processresponse to molecule of oomycetes origin
GO:0009626Biological Processplant-type hypersensitive response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MNSVFSIDDF ADPFWEAPPL SPDPPKAVTA SGLSRSQSEW TFEMFLEEMS SPMSAVSASS  60
ATGNAIGVSS GQSVPSVSGT DDVEDEGRVR NRDLENRDSP LPSDRSPAVV ADSDECHQVL  120
KSKLETEGAA AVALGAASVK PEDASSSPEI QILPDQSGPR VQVGLELKQA RSGSSREYSD  180
DDDELEGDTE TTGHLGPEDV KRARRMLSNR ESARRSRRRK QEQMSELETQ VSQLNVEHSS  240
LLKQLSDVNH KYDEAAVGNR ILKADIETLR AKVKMAEETV KRVTGMNPLL LRRSNGHNSV  300
MPLVGNRMET SCIATLQAHS NLNHVSNAQV PEITLPAILP PRLDNNFGRH SQVSPFLNSQ  360
STSPGKISCG ELQIQKMGSG QKQVGPTGHF ASAPNPYRPV HGWSHEPTHS VPNNDSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213220RRSRRRKQ
2215220SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the C-box-like motif (5'-TGCTGACGTCA-3') and G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of gene promoters. Binds to the 5'-ACGT-3' motif of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. Involved in the defense responses to the biotrophic pathogen Hyaloperonospora parasitica and oxidative stress responses; mediates positively cell death (PubMed:12657652, PubMed:16957775, PubMed:19261733, PubMed:19531597). Promotes BZIP53-mediated response to hypoosmolarity stress that leads to POX1/PRODH1 accumulation (PubMed:16810321). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:16810321, ECO:0000269|PubMed:16957775, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010542864.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010542864.10.0PREDICTED: basic leucine zipper 10 isoform X1
SwissprotO227631e-129BZP10_ARATH; Basic leucine zipper 10
TrEMBLA0A1P8B7A61e-126A0A1P8B7A6_ARATH; BZIP transcription factor family protein
STRINGXP_010542864.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM148711720
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02640.11e-112bZIP family protein
Publications ? help Back to Top
  1. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]