PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010541808.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | Dof | ||||||||
Protein Properties | Length: 337aa MW: 36722.7 Da PI: 8.4043 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.1 | 4.7e-39 | 62 | 121 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 k++al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rknk+s XP_010541808.1 62 KDQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRS 121 7899******************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-30 | 58 | 120 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.5E-33 | 63 | 120 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.134 | 66 | 120 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 68 | 104 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence Send to blast |
MDTAQWPQIV VKPLEEIITN TCPKPPRLQP PPPQQTTTAH GAVAATEAEA AGGGERKARP 60 QKDQALNCPR CNSTNTKFCY YNNYSLTQPR YFCKTCRRYW TEGGSLRNIP VGGGSRKNKR 120 SNYSNGHNHN INNPSNSAPL PAPKKHLSEH HLMSMTQQGL TGQNPKFHET QDLNLRFPHG 180 FRSNLTELIQ YGGNNNSNQV LLPSCSATSA AMTTSSLDLL SSNSGSSNSF MALPSVHHHQ 240 DPSGFSMQDH YKPCTSTSLL GFSLDRGFHH GAQQEDGSGI GERLLFPFED LKLPVPLSSA 300 STTSNHNIIS EINDQKQGGD ATASAGYWTG MLSGGSW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010541808.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010541808.1 | 0.0 | PREDICTED: dof zinc finger protein DOF4.6 isoform X2 | ||||
Swissprot | Q8LAP8 | 1e-111 | DOF46_ARATH; Dof zinc finger protein DOF4.6 | ||||
TrEMBL | A0A397L765 | 1e-121 | A0A397L765_BRACM; Uncharacterized protein | ||||
TrEMBL | M4DRV4 | 1e-121 | M4DRV4_BRARP; Uncharacterized protein | ||||
STRING | XP_010541804.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 4e-99 | Dof family protein |
Publications ? help Back to Top | |||
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