PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010539042.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 522aa    MW: 56802.8 Da    PI: 6.5272
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010539042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.41e-10370428563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK+ +i+eLe kv++L++e ++L  +l  l+  +a l +++
  XP_010539042.1 370 KRAKRVLANRQSAARSKERKLRYIAELEHKVQTLQTEATTLSAQLTILQRDSAGLANQN 428
                     9******************************************9999998888777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.5E-17366430IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.645368431IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-10370427No hitNo description
SuperFamilySSF579591.04E-10370421No hitNo description
PfamPF001702.0E-9370428IPR004827Basic-leucine zipper domain
CDDcd147032.63E-22371422No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    Send to blast
MERYRENNNS EMSASTAGQI RTSPDSSKRP GIPPSHPNNP ATFAYVQAAG SRLGCQQLSS  60
RNSNPGPSHS RSLSQPPFFS LDSLPPLSPS PFKGSSISPT SELGSLDVSM EDKSGSISGQ  120
QLPWPFSRSN EYETSAILNR LPPRKGHRRS SSDTPLGFLG MVHSSSSPNS VHLGNMGMMN  180
RLVPSSKVEK PIQLVKRESE WSGDGRSVAE GIGERKLEGE LTDDLVDAYM SLDNIGSLSS  240
GATEEKDLDS RASGSKTNGG GDSSDNEVES AASRRREGIK RTASGDVVPT GRHQRSVSVD  300
SYMGADFLFD DASLKASPPP LGTQAGQQFP SESGLKNLNF EFARGEFSQA ELKKIMEDEK  360
LAEIASSDPK RAKRVLANRQ SAARSKERKL RYIAELEHKV QTLQTEATTL SAQLTILQRD  420
SAGLANQNNE LKFRLQAMEQ QAQLKDALNE ALATEVQRLK IESMAAEFGG ENHISDQMAR  480
QLSIQSGVLP TQSHNNIYQQ HHQTHQSPQT EQGSSEEVKE PL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010539042.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010539041.10.0PREDICTED: probable transcription factor PosF21
RefseqXP_010539042.10.0PREDICTED: probable transcription factor PosF21
TrEMBLA0A1R3IXX91e-176A0A1R3IXX9_COCAP; Uncharacterized protein
STRINGXP_010539041.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-105bZIP family protein