PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010536266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | NAC | ||||||||
Protein Properties | Length: 175aa MW: 20724.9 Da PI: 9.4078 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 132.2 | 3.6e-41 | 24 | 148 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 p+G rF Ptdeelv yLk+k+e ++l++ ++i +v+iy+++P++L +++++ ++ ewyfF++rdkky++ r+nr++ g+Wka+gk v+ XP_010536266.1 24 PAGWRFAPTDEELVFLYLKPKIELQPLPM-HMIMDVNIYNHHPETLSAEYEKfNDGEWYFFTPRDKKYPKTYRPNRKAIGGFWKASGKYAGVYL- 116 89***************************.89**************9654443777********************9999**************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 +g+++g k+ +vfy+g++p+++ktdW+m+ey XP_010536266.1 117 DGREIGKKRLMVFYNGNHPNSKKTDWLMKEYC 148 999****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.97E-46 | 21 | 155 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 41.58 | 23 | 173 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.3E-21 | 24 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence Send to blast |
MPNRWRARAT EADPEILDFL SKIPAGWRFA PTDEELVFLY LKPKIELQPL PMHMIMDVNI 60 YNHHPETLSA EYEKFNDGEW YFFTPRDKKY PKTYRPNRKA IGGFWKASGK YAGVYLDGRE 120 IGKKRLMVFY NGNHPNSKKT DWLMKEYCCT VATPPPRQET DQENDMQVRV LIKKM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-32 | 23 | 147 | 15 | 138 | Stress-induced transcription factor NAC1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010536266.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010536266.1 | 1e-130 | PREDICTED: NAC transcription factor 25-like | ||||
STRING | XP_010536266.1 | 1e-130 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM18874 | 6 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 9e-37 | NAC domain containing protein 25 |