PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010534332.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 333aa    MW: 37218 Da    PI: 9.0714
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010534332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.1e-104982639
                    HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39
                      rr+++NReAAr+sR+RKka++++Le+   +L+
  XP_010534332.1 49 TLRRLAQNREAARKSRLRKKAYVQQLENSRLKLT 82
                    569************************9655555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.001844136IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.5194690IPR004827Basic-leucine zipper domain
PfamPF001702.3E-74984IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-75089No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-75177No hitNo description
PROSITE patternPS0003605166IPR004827Basic-leucine zipper domain
PfamPF141445.6E-35130206IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MADTSPRTSI STDADTDHRD QMFNGGQLVV AASDSSDRSK DKLDQKPQTL RRLAQNREAA  60
RKSRLRKKAY VQQLENSRLK LTQLEQEFQK SRQQGIFMSS SGDQAHSTGG NGAMAFDAEY  120
SRWQEEKSRH MNELRSALNA HASDAELRII VDALMAHYEE LFRIKSNAAK NDVFHLLSGM  180
WKTPAERCFL WLGGFRSSEL LKLVASQLEP LTEQQSIGII NLQQSSQQAE DALSQGMDAL  240
QQSLAETLSN GTLGSSGSSG NVANYMGQMA MAMGKLGTLE GFIRQADNLR LQMLQQMLRI  300
LTTRQSARAL LAIHEYFSRL CALSSLWIAR PRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010534332.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010534328.10.0PREDICTED: transcription factor TGA6-like isoform X1
RefseqXP_010534329.10.0PREDICTED: transcription factor TGA6-like isoform X1
RefseqXP_010534331.10.0PREDICTED: transcription factor TGA6-like isoform X1
RefseqXP_010534332.10.0PREDICTED: transcription factor TGA6-like isoform X1
RefseqXP_010534333.10.0PREDICTED: transcription factor TGA6-like isoform X1
RefseqXP_010534335.10.0PREDICTED: transcription factor TGA6-like isoform X1
SwissprotQ391400.0TGA6_ARATH; Transcription factor TGA6
TrEMBLE4MX780.0E4MX78_EUTHA; mRNA, clone: RTFL01-10-O14
TrEMBLV4KRR30.0V4KRR3_EUTSA; Uncharacterized protein
STRINGXP_010534328.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-174TGACG motif-binding factor 6