PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010533837.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | GeBP | ||||||||
Protein Properties | Length: 397aa MW: 43600.4 Da PI: 4.9619 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 135.7 | 1.6e-42 | 169 | 264 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 +fqrlwse+Dei++L+G+idfk++tg+sp+ddi++fye +kksisf+vsk q+++Kir+L+kK+ ++ k k+g++psf k+h++k+felsk iW XP_010533837.1 169 YFQRLWSEDDEIAVLKGIIDFKSDTGVSPFDDINGFYELAKKSISFDVSKVQFMDKIRSLRKKYVNNLGKGKNGEDPSFVKAHERKAFELSKAIW 263 79********************************************************************************************* PP DUF573 97 g 97 g XP_010533837.1 264 G 264 9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 8.6E-34 | 170 | 264 | IPR007592 | Protein of unknown function DUF573 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005730 | Cellular Component | nucleolus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 397 aa Download sequence Send to blast |
MSPKRPNPME DPPTASSSEE EEEVSMDEDE EEDETHKEKS SSDEEADDGD DREVSVKNPL 60 SASAKPGSAS AVTIAVPGKT VAPPKQASDS DSGSETETDS DSDTDRRERV AVKPVEQNPE 120 SVKAKPSDAL ASSAKSAVKR PSKTARPPND VKRVRKEGGT PGEDTKKTYF QRLWSEDDEI 180 AVLKGIIDFK SDTGVSPFDD INGFYELAKK SISFDVSKVQ FMDKIRSLRK KYVNNLGKGK 240 NGEDPSFVKA HERKAFELSK AIWGPEGMAN ESAMKSNGKS KKSQKGKMKS LESLKQELFP 300 SHNGKREELD AEEIASRLVS RSNGFETMLV KAMAGFGVDE LAVKQGWAMV SSEDKKRIEE 360 KWNALRAAEI EFLVEKSEFI HEASKLIAET LGSSSKI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010533837.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010533837.1 | 0.0 | PREDICTED: probable transcription factor At1g61730 | ||||
TrEMBL | V4KPG5 | 7e-99 | V4KPG5_EUTSA; Uncharacterized protein | ||||
STRING | XP_010533837.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM313 | 28 | 181 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 2e-67 | DNA-binding storekeeper protein-related transcriptional regulator |