PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010532634.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 156aa    MW: 17726.1 Da    PI: 7.7521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010532634.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.32.9e-212172256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdps ng   r +lg+f+tae+Aa+a+++a+ +l+g+
  XP_010532634.1 21 RYRGVRRRP-WGKYAAEIRDPSRNG--SRLWLGTFDTAEDAARAYDRAAFNLRGH 72
                    6********.**********98887..**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.63E-182080No hitNo description
SuperFamilySSF541713.47E-242180IPR016177DNA-binding domain
PfamPF008479.6E-152172IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.3E-322181IPR001471AP2/ERF domain
SMARTSM003803.5E-382185IPR001471AP2/ERF domain
PROSITE profilePS5103224.9082179IPR001471AP2/ERF domain
PRINTSPR003671.3E-112233IPR001471AP2/ERF domain
PRINTSPR003671.3E-114561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MEGSSTRSNN NNNQQEDRQA RYRGVRRRPW GKYAAEIRDP SRNGSRLWLG TFDTAEDAAR  60
AYDRAAFNLR GHLAILNFPN EYYSRVADYS PRPPLPHASS SSSSFSSSFN YMSSGSNSSG  120
GSRQNEGEVF EFEYLDDRVL DELLGGEERK KRSNHD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-311913912114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010532634.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010532634.11e-110PREDICTED: ethylene-responsive transcription factor ERF098
SwissprotQ9LTC51e-59ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLR0HQU31e-60R0HQU3_9BRAS; Uncharacterized protein
STRINGXP_010532634.11e-109(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-49ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]