PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010531914.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family STAT
Protein Properties Length: 689aa    MW: 77776.9 Da    PI: 5.481
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010531914.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT186.33.7e-582263421117
            STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkky 95 
                     ldv+l+na+g+ ++kdv+vvasLly dsg++ve+++++eapLL+s +Gvefs+ drp+kll+Gra+fklkisqLssk+dnrLf+ikfeip++k y
  XP_010531914.1 226 LDVILSNAVGHHARKDVQVVASLLYVDSGTPVEQTNETEAPLLASHEGVEFSAGDRPIKLLNGRATFKLKISQLSSKSDNRLFCIKFEIPNVKGY 320
                     8********************************************************************************************** PP

            STAT  96 pfleavskpirCisrsrntrss 117
                     pfleav++pirCisrsr+t ++
  XP_010531914.1 321 PFLEAVTNPIRCISRSRDTMPK 342
                     *****************98765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.60.120.2003.7E-425151IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF498991.06E-628165IPR013320Concanavalin A-like lectin/glucanase domain
CDDcd103386.87E-61584689No hitNo description
SuperFamilySSF555508.42E-10592653IPR000980SH2 domain
Gene3DG3DSA:3.30.505.101.2E-6592642IPR000980SH2 domain
PROSITE profilePS500019.307595689IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    Send to blast
MEGDCLIDTD KYSLLEDFNV DVEVQDEDFE AFSLCFWVYL FNSTTFPSTI IRQVHSAMSV  60
SAPFLVLDEN KNMMLLPLTL LHKEAPDPVN TASWTEVPSV STKAEFPLEK WVHVGCEVSR  120
HYMRLHINGD IVGEQLLTSL LPKDTNPEFP GKISLFSVGG DGYSVQGFIQ CAEVLPASVP  180
VTCHYVKDPP LWLSVDKPST SGIELDDDGV WSIVGGKASC RRIFSLDVIL SNAVGHHARK  240
DVQVVASLLY VDSGTPVEQT NETEAPLLAS HEGVEFSAGD RPIKLLNGRA TFKLKISQLS  300
SKSDNRLFCI KFEIPNVKGY PFLEAVTNPI RCISRSRDTM PKRVNHVDHP VGGVPTLVSS  360
NTSPDLHYDA SSVKRVRLGE ERISDREEPV QQHNSLTQAS RQFENGNGMS MEWRPQNNEE  420
ENSSTDSDSA EMRDSVFRRY TISDSTIFRY CLGNLAERSL LLKEITNNSS DEEVSEFADQ  480
VSLYSGCSHH GNQIKMARKL IAEGTNAWML ISRNNQHVHW HSAVCEIEEH FMRIAQCSSR  540
SLTQQDFELL RRISGCYEYM TQENFEKMWC WLFPVAKSIS RGLINGMWRS VSPKWIEGFI  600
TKEDAEISLQ GQEPGTFILR FPTLRSWPHP DAGSLVVTYV GHDFSIRHRL LTLDHISNPR  660
ESYMDAKPLQ DMLLAEPELS RLGRIIRSH
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010531914.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010531914.10.0PREDICTED: uncharacterized protein LOC104808083
SwissprotQ56XZ10.0SHB_ARATH; SH2 domain-containing protein B
TrEMBLV4KYL30.0V4KYL3_EUTSA; Uncharacterized protein
STRINGXP_010531914.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM52052645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.10.0SH2 domain protein B
Publications ? help Back to Top
  1. Yamada Y,Wang HY,Fukuzawa M,Barton GJ,Williams JG
    A new family of transcription factors.
    Development, 2008. 135(18): p. 3093-101
    [PMID:18701541]