PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010531261.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family MYB
Protein Properties Length: 326aa    MW: 34899.1 Da    PI: 8.8779
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010531261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding63.83.4e-201358147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd+ll ++v+++G+++W++I++ ++ gR++k+c++rw + 
   XP_010531261.1 13 KGPWSPEEDDLLQKLVHKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 58
                     79******************************.***********985 PP

2Myb_DNA-binding57.23.8e-1867109347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEde +++a++++G++ W+tIar ++ gRt++ +k++w++ 
   XP_010531261.1  67 AFTPEEDETIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 109
                      79******************.*********.***********986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129426.758863IPR017930Myb domain
SuperFamilySSF466896.47E-3210106IPR009057Homeodomain-like
SMARTSM007175.4E-181261IPR001005SANT/Myb domain
PfamPF002493.2E-201358IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-261466IPR009057Homeodomain-like
CDDcd001673.70E-171557No hitNo description
SMARTSM007173.8E-1564112IPR001005SANT/Myb domain
PROSITE profilePS5129421.46765114IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-2367113IPR009057Homeodomain-like
PfamPF002491.2E-1567109IPR001005SANT/Myb domain
CDDcd001671.80E-1267110No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0010200Biological Processresponse to chitin
GO:0046686Biological Processresponse to cadmium ion
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MSGPSRREME RIKGPWSPEE DDLLQKLVHK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS  60
PEVEHRAFTP EEDETIIRAH ARFGNKWATI ARLLNGRTDN AIKNHWNSTL KRKCVTMVSG  120
GEGQSYDFVS NGGYDGNLTA EHPLKRTASG GGVVSTGLYM NPGSPSGSDV SDQSNGPFPP  180
ASLVYKPTAR AGAVEVTSSS SAGDPPTYLS LSLPWAENGE KSAAAGVTES MIQKTRTRGG  240
YTAELFPARR EEERASGLMT GFNGEFMTVV HDMIRAEVRS YMTDLQLGNG GGGGGGRGGG  300
GGLCSVGGVG FRELIPVNQI GVGRME
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A2e-41101131104MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1294301GGRGGGGG
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00476DAPTransfer from AT4G37260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010531261.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010531261.10.0PREDICTED: transcription factor MYB44
SwissprotO231601e-146MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A3P6FLB31e-150A0A3P6FLB3_BRAOL; Uncharacterized protein
STRINGXP_010531261.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM67728135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.11e-147myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]