PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010530952.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family Nin-like
Protein Properties Length: 965aa    MW: 107108 Da    PI: 6.4171
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010530952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK90.51.3e-28645695252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ek+isle l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++
  XP_010530952.1 645 EKTISLEILRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 695
                     799**********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.348634715IPR003035RWP-RK domain
PfamPF020429.1E-25647695IPR003035RWP-RK domain
SuperFamilySSF542773.64E-23857949No hitNo description
Gene3DG3DSA:3.10.20.2405.2E-24863947No hitNo description
SMARTSM006662.0E-26866949IPR000270PB1 domain
PROSITE profilePS5174529.239866949IPR000270PB1 domain
PfamPF005648.6E-20867948IPR000270PB1 domain
CDDcd064077.08E-43867948No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 965 aa     Download sequence    Send to blast
MEGGSGGGGF SPNSSFGTFP ETAMDLDFME ELLFDGCWLE TTDGKSFKQP GPSPSNSNSV  60
KDSPFLFRYQ DLKSSNVGLN PPQNTSNGET ESKLPPSPTY LKKIQDLHET HQSMDQESFD  120
LAATSSTQSE KLLVEGAEAG RRWWICPAPS SSVKDRLVHA IQHLQEAVID KNFLIQIWVP  180
FQKGGKNFLT TLEQPHLVNP KYLSLQEYRH VSEKYSFPAD EDSKESVGLP GRVFLGKLPE  240
WTPDVRFFRS EEYPRIKEAQ KCDVRGSLAL PVFERGSGTC LGVVEIVTTT QKINYRPELE  300
NICKALEAVD LRSSSNLNLP SIEFLQVYNE FYQAALPEIS EFLVSVCTLY DLPLALTWAP  360
CARQGKSGCR HSDENYSQCV STIDSACFVP DEHSKNFLEA CSEHHLLQGE GVVGKAFKMN  420
KRCFVPDVTT FSKTNYPLSH HAKIFGLHAA LAVPVKNKYT GAVEFVLEFF LPKACIDTES  480
RKEMLILLST TLERDFRSLN LVVDKETEEE VILPVRDTMV FLDHPLGGGE ATQNLKSSTL  540
TEISREESSW ISHMMEANRK GKGVSLSWEY QKEEPKEEFK MTTGWDDNQP DPDHHNFLSG  600
AGQFQRGSSS GFMIDIDPSI ESPPSGGGQT SGNRKPGEKR RTKTEKTISL EILRQYFAGS  660
LKDAAKSIGV CPTTLKRICR QHGITRWPSR KIKKVGHSLK KLQLVMDSVQ GVQGSIQLNS  720
FYTSFPELSS PNMSGSGLYL KSNDQSAHLN TQPENGVSPQ ENATAPRSPS SSCSQSSGSS  780
TCCSTGANQS TNTANTSNTA IPLVAENAGG ILKRAHSEAE LHIVNQEEPK VFWRTQSHKT  840
FNDHPLLENL PPLPGSSRRS LKAGGAVKVK ATFGEAKVRL SLLPGWGFKE LQQEIARRFN  900
IDDITRFDLK YLDDDREWIL LTCDADLEEC INIYRSYQSH TIKISVNQAF QVKLGSSFGS  960
AAPLS
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010530952.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010530951.10.0PREDICTED: protein NLP2-like isoform X1
SwissprotQ7X9B90.0NLP2_ARATH; Protein NLP2
TrEMBLR0GGQ70.0R0GGQ7_9BRAS; Uncharacterized protein
STRINGXP_010530951.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.10.0Nin-like family protein