PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010530773.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 427aa MW: 46724.1 Da PI: 8.9181 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.3 | 4e-14 | 349 | 401 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r++r++kNRe+A rsR+RK+a++ eLe +v++L++ N +L+k+ e+ ++ + XP_010530773.1 349 RRQKRMIKNRESAARSRARKQAYTLELEAEVAKLKELNNELQKKQAEIMEMQK 401 69****************************************99999888865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.6E-12 | 345 | 410 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 347 | 398 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.22E-24 | 349 | 403 | No hit | No description |
Pfam | PF00170 | 2.9E-12 | 349 | 402 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.9E-13 | 349 | 399 | No hit | No description |
SuperFamily | SSF57959 | 5.38E-10 | 349 | 398 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 352 | 367 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 427 aa Download sequence Send to blast |
MGSGVNFKSF ADGDMNQRQT VTGNLPLARQ NSVFSLTFDE FQNTWGGLGK DFGSMNMDEL 60 LKNIWNAEEN QAMRNDNSSN NNNINNGNSI NTGNSNSLGV AVGGDGCVGF AGGNLQRQGS 120 LTLPRTLSQK TVDEVWKELM RDSDNDGGSG GSNGGSNVPQ RQQTLGEMTL EEFLVRAGVV 180 REEPQSLERP SNINGGFYGF GGNTNFGLPQ NSFVTSQHPD FSGNAAGIQM GGLPPRSQPQ 240 QLIQQQQTTF PKQATIAFNN TVDMVDSSKP AIQEVRSSTV GMQNCPVSSN SLQAIEFKTS 300 VAVAAASPRS QMSPDLTPKS NMDAFLSPVP YMFGRGRRSG AAVEKVIERR QKRMIKNRES 360 AARSRARKQA YTLELEAEVA KLKELNNELQ KKQAEIMEMQ KNQLLESLHQ PWGCKRQCLR 420 RTLTGPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010530773.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010530772.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Refseq | XP_010530773.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
Swissprot | Q9M7Q3 | 0.0 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | E4MY11 | 1e-179 | E4MY11_EUTHA; mRNA, clone: RTFL01-30-J01 | ||||
TrEMBL | V4MBG2 | 1e-179 | V4MBG2_EUTSA; Uncharacterized protein | ||||
STRING | XP_010530772.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 1e-140 | abscisic acid responsive elements-binding factor 3 |