PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010529178.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 374aa    MW: 41667.2 Da    PI: 4.46
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010529178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-18112162255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd + ng   r++lg+f+tae Aa a+++a+ +++g
  XP_010529178.1 112 QYRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEAAAMAYDKAAVRIRG 162
                     69*******.**********44465..***********************9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.7E-29111172IPR001471AP2/ERF domain
SMARTSM003804.0E-35112177IPR001471AP2/ERF domain
PfamPF008478.2E-12112162IPR001471AP2/ERF domain
CDDcd000182.85E-18112171No hitNo description
SuperFamilySSF541711.57E-20112172IPR016177DNA-binding domain
PROSITE profilePS5103223.143112171IPR001471AP2/ERF domain
PRINTSPR003671.4E-10113124IPR001471AP2/ERF domain
PRINTSPR003671.4E-10136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MAFGNIQEPN VGILENVWAN FIGKPKNEKR SIPVPGSWEG MPCLDGREDS TENLKRIPSL  60
EGWLSMGDDE WEEIFNGISS FPSSITEKPL SETKLTGSST SSARVSCPTT RQYRGVRRRP  120
WGKYAAEIRD STRNGVRVWL GTFDTAEAAA MAYDKAAVRI RGLHKAHTNF PLDKIIKAME  180
ETGCASSYNG LLGNMEIGSD TTKEAITDDR EYQDYPSLMN FPTEMDINVM EIGNKPNNCC  240
PPSAQSISRA SGYNITTEEA VSGYDEPAFR IRRSGTAHMN LADESTVENT TEIGFPPSCY  300
YDSVKDSDIY GFLGSQETGF DSRKRNRWSD GSGLIQEDAE FQEPELKKIV GRGFDVFEFE  360
DLGSEYLENL LSTF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-23111172161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010529178.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010529178.10.0PREDICTED: ethylene-responsive transcription factor ERF091
SwissprotO495153e-65ERF91_ARATH; Ethylene-responsive transcription factor ERF091
STRINGXP_010529178.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.13e-58ERF family protein