PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010528592.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family GRF
Protein Properties Length: 313aa    MW: 34772.5 Da    PI: 8.2387
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010528592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.51.3e-2467111145
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                     d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+
  XP_010528592.1  67 DPEPGRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRKPVES 111
                     79****************************************997 PP

2QLQ58.71.7e-20541137
             QLQ  1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                    s FT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk
  XP_010528592.1  5 SLFTVSQWQELEHQALIFKYIIAGLPVPPDLVLPIQK 41
                    68*********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009517.0E-11541IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166622.845641IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088804.3E-15740IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.83167111IPR014977WRC domain
PfamPF088794.2E-2168110IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MRSSSLFTVS QWQELEHQAL IFKYIIAGLP VPPDLVLPIQ KSFENISHRF FTHPSFSSCS  60
LYGKKIDPEP GRCRRTDGKK WRCSKEAHPD SKYCERHMHR GRNRSRKPVE SSLQPTNTTT  120
SMHSSSSSST ATSLFTVVPG GGHSGNYQNI PLHRFGNIQP ATASVNCDQS TYNVDSIPFG  180
IPSKDYGYMQ MQGLKPESVE HSFFSAASGS NKNVQTSLLE NGNTWPVMQG SLQNSYDQSS  240
SFFNIDFASG EATKHDGQSL RPFLDEWPKA RASWSGLEDD RSNQYTTTTQ LSISIPMVSS  300
GFSSANSHSP HDT
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010528592.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFQ3824884e-42FQ382488.1 Vitis vinifera clone SS0ABG55YD19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010528592.10.0PREDICTED: growth-regulating factor 3-like isoform X2
RefseqXP_010528594.10.0PREDICTED: growth-regulating factor 3-like isoform X2
TrEMBLA0A067EAQ21e-135A0A067EAQ2_CITSI; Uncharacterized protein
STRINGXP_010528591.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.11e-42growth-regulating factor 5