PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010527136.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | Dof | ||||||||
Protein Properties | Length: 144aa MW: 15024.8 Da PI: 6.8924 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 110.8 | 6.4e-35 | 14 | 65 | 2 | 53 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGg 53 ++++++cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++P+ XP_010527136.1 14 EQEQIPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPIAV 65 57899********************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-24 | 4 | 64 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.2E-30 | 16 | 65 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 26.291 | 18 | 72 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 20 | 56 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence Send to blast |
MTKPHGGAGL GPPEQEQIPC PRCDSTNTKF CYYNNYNFSQ PRHFCKSCRR YWTHGGTLRD 60 IPIAVAAHGS GGLIGLSGFG LGLGTGFEDV SFGLGSGVGS NGGPAAPMAA TWQLEGLENN 120 AGFVAGDCFA WPDLAISTPG NTLK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010527136.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP662922 | 4e-53 | KP662922.1 Cajanus cajan Dof38 (Dof38) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010527136.1 | 1e-103 | PREDICTED: dof zinc finger protein DOF3.4-like | ||||
TrEMBL | A0A2P5RUP8 | 3e-47 | A0A2P5RUP8_GOSBA; Uncharacterized protein | ||||
STRING | XP_010527136.1 | 1e-102 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66940.1 | 1e-33 | Dof family protein |