PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010524912.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 364aa    MW: 38559.1 Da    PI: 7.5076
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010524912.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.79.6e-17184240460
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                     +kr rr+ +NRe+ArrsR RK+a + eLe+ v +L  eN++L k l   ++++    
  XP_010524912.1 184 VKRVRRMLSNRESARRSRGRKQAHLTELETQVSQLRVENSTLLKSLTDVSQTCNDAA 240
                     79*********************************************9999998655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-18181245IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.932183234IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.9E-12183237No hitNo description
SuperFamilySSF579592.94E-12184235No hitNo description
PfamPF001709.0E-14184237IPR004827Basic-leucine zipper domain
CDDcd147026.27E-20186237No hitNo description
PROSITE patternPS000360188203IPR004827Basic-leucine zipper domain
PfamPF124985.2E-31252360IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MERVFSVEEI SGELWPAASD KETEDMVSGD ADGTAKMNRS ASEWAFQRFI RESSSSSAAA  60
TDGGTGEGLG PNGISAAGSP SPGVLVDSEE YRAYLKSKLN LACAAVAMKR ASFTKPQEMA  120
GGADSGAQQA YPASSKVGRR FLVAAMPKKP CAPVKSITSG SEISGDEEAD AEAETTGNTA  180
PLDVKRVRRM LSNRESARRS RGRKQAHLTE LETQVSQLRV ENSTLLKSLT DVSQTCNDAA  240
VENRVLKANI ETLRAKVKMA EETVKRITGL NPILPDVSAL SVPSFHGSPS ETSADGAVPV  300
QDDLKNHIFR PSPNSSLVAD NNVAEVSSAT SKALTGCKTG RTASLHRVAS LEHLQKRIRS  360
AGEP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197204RRSRGRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in controlling responses to starvation (PubMed:26263501). BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000269|PubMed:26263501, ECO:0000269|PubMed:29348240}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010524912.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010524912.10.0PREDICTED: basic leucine zipper 63-like isoform X1
SwissprotB9DGI81e-102BZP63_ARATH; Basic leucine zipper 63
TrEMBLA0A1J3HN551e-111A0A1J3HN55_NOCCA; Basic leucine zipper 63
STRINGXP_010524912.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM68462743
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.27e-95bZIP family protein
Publications ? help Back to Top
  1. Brand LH,Kirchler T,Hummel S,Chaban C,Wanke D
    DPI-ELISA: a fast and versatile method to specify the binding of plant transcription factors to DNA in vitro.
    Plant Methods, 2010. 6: p. 25
    [PMID:21108821]
  2. Brand LH, et al.
    Screening for protein-DNA interactions by automatable DNA-protein interaction ELISA.
    PLoS ONE, 2013. 8(10): p. e75177
    [PMID:24146751]
  3. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  4. Mair A, et al.
    SnRK1-triggered switch of bZIP63 dimerization mediates the low-energy response in plants.
    Elife, 2016.
    [PMID:26263501]
  5. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]