PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010523715.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family TCP
Protein Properties Length: 357aa    MW: 37354.1 Da    PI: 10.3111
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010523715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1195.9e-3771163295
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 
                     ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++  +++ +  + ++ ++  ++ ++
  XP_010523715.1  71 PPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVNGALKIPTTTNANP--EPGEN 163
                     789*************************************************************999995553222222222222222..22222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036346.3E-3076151IPR005333Transcription factor, TCP
PROSITE profilePS5136927.14177131IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MTTTQKLEIG EDDDMSTVDL SINGVGTSET SKTRVVDLTR LTPKEEPDQV GSVKPPPSST  60
VQVPSTSMAP PPKRASTKDR HTKVEGRGRR IRMPATCAAR IFQLTRELGH KSDGETIRWL  120
LEHAEPAIIA ATGTGTVPAI AMSVNGALKI PTTTNANPEP GENPAKKRRK RPSNSEYIDI  180
NDAVSVPSGL APITTTQHPP LPSAASPVPV APAALQVLPQ GVXIPSNAVF LVPHVANAAG  240
PSNQPQVLAF PATATPLINI SARPMTSSFV GAMQQAAAMA APLQAVQSSS MLSVSTVAAS  300
KPSRTTSVMA SSSSSSSGIT TGSTASGSST RTHMLRDFSL EIYDKQELQL MARSSKH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165169KKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010523715.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010523715.10.0PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP9-like
SwissprotO646471e-110TCP9_ARATH; Transcription factor TCP9
TrEMBLV4KMR61e-126V4KMR6_EUTSA; Uncharacterized protein
STRINGXP_010523715.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM98312434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.15e-93TCP family protein