PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010522875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | NAC | ||||||||
Protein Properties | Length: 464aa MW: 52327.3 Da PI: 5.792 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 136.5 | 1.8e-42 | 5 | 134 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +G+rFhPtd+el+++yL+ k+ g++ ++++++e+d +k++PwdL+ +k+++++ wyfFs+rd+ ++++k ++r+t+sg+Wkatg d+++++ XP_010522875.1 5 VGYRFHPTDDELITYYLNSKIMGNNtWLVHQAMTEIDFCKFDPWDLHlqSKISSNDPVWYFFSPRDNPNPKKKGTKRTTNSGFWKATGVDRKIKR 99 7**********************994334466**************85347777888************************************** PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k ++ ++g+kktLvfy+gr p+g++t vmhey+ XP_010522875.1 100 KgGSGEIGVKKTLVFYSGRVPNGSRTPYVMHEYHS 134 977778***************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 45.487 | 3 | 152 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.19E-44 | 4 | 152 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.0E-25 | 5 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005886 | Cellular Component | plasma membrane | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 464 aa Download sequence Send to blast |
MDRLVGYRFH PTDDELITYY LNSKIMGNNT WLVHQAMTEI DFCKFDPWDL HLQSKISSND 60 PVWYFFSPRD NPNPKKKGTK RTTNSGFWKA TGVDRKIKRK GGSGEIGVKK TLVFYSGRVP 120 NGSRTPYVMH EYHSSVLSPG QNTYVICKVK FKGDAADAPS GNGSEPSYSL ASNLNDIEMS 180 TGSGFNCQGQ VQVQGTPESF YGITENDLVM PLNDQTGLSL WEVQNLEKFG GNPNVELQTP 240 YWNQNENESN YSLMNLNQED WKYLFDDDTE QAMYKHVQED HNDYRPQEAL TGVCVDSSSD 300 SDAESVSAKS YQETSSPVDT VGSSNGNHQT DLDDDVHVEE MLSSLDHKEL VATTTSEKAG 360 PSRPQRRYNN GPIRFQLPSK QEVKKVKERA SVAAVPREMT VWKVAQDTNK AASVVVAREK 420 KGWFIWHDAI EKRREHPPPY VYLVNMVVGI FLLVSLLYAI ISVS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-31 | 6 | 133 | 18 | 139 | Stress-induced transcription factor NAC1 |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00426 | DAP | Transfer from AT4G01550 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010522875.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010522875.1 | 0.0 | PREDICTED: NAC domain-containing protein 69-like isoform X2 | ||||
STRING | XP_010522874.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01550.1 | 1e-103 | NAC domain containing protein 69 |