PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG045524t2 | ||||||||
Common Name | TCM_045524 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | bZIP | ||||||||
Protein Properties | Length: 366aa MW: 39585.9 Da PI: 6.3565 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.6 | 1.7e-10 | 164 | 212 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 kr++r + NR +A rs +RK +i eLe+kv++L++e ++L +l + Thecc1EG045524t2 164 KRAKRIIANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQ 212 9****************************************99887655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.3E-16 | 160 | 224 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.599 | 162 | 225 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.1E-9 | 164 | 218 | No hit | No description |
Pfam | PF00170 | 3.2E-9 | 164 | 212 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.7E-11 | 164 | 215 | No hit | No description |
CDD | cd14703 | 2.44E-24 | 165 | 214 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
MPDPPSLSPN PDQPIHSNAS STTQTTPSFA NPTTFRGSYH RRAQSEVQFR IPDDLDLVSD 60 PFEGLGSEDD LFCSYMDIEK LGGSSKGADE GGAAGSSSAG SGQNPKGGEE TSGGSGMGEK 120 STGGGKGRHR YSNSVDGCSM MESIEAKKAM APDKLAELWT VDPKRAKRII ANRQSAARSK 180 ERKARYISEL ERKVQTLQTE ATTLSAQLTL FQRDTTGLST ENTELKLRLQ AMEQQAQLRD 240 ALNEALKKEV ERLKIATGEM TTPTDTFNLG MHHIPYTQSS YFPPQPQHVQ VDTHNIQMPQ 300 FHPFQSNMLT PNQSVVAASN SHAYADMMQQ DPLGRLQGLD ISSRGSRLVK SEGPSISAGE 360 HGGTL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00303 | DAP | Transfer from AT2G40620 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007011316.2 | 0.0 | PREDICTED: transcription factor RF2b isoform X2 | ||||
Swissprot | O22873 | 1e-122 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | A0A061FSP5 | 0.0 | A0A061FSP5_THECC; Basic-leucine zipper transcription factor family protein isoform 2 | ||||
STRING | EOY20125 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40620.1 | 1e-118 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG045524t2 |
Entrez Gene | 18587475 |