PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG044633t1 | ||||||||
Common Name | TCM_044633, TCM_044639 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | NAC | ||||||||
Protein Properties | Length: 170aa MW: 19787.6 Da PI: 9.5333 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76.4 | 6.5e-24 | 2 | 134 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 +Gf F+P+d l+ +yL kv++k+ l+l++v ik++d+y ePw++ ++ ++++++yfF+k +kk+++g+r nr++ +g+W Thecc1EG044633t1 2 FVGFGFEPSDRSLM-CYLFSKVTSKSmLHLDQVqIKDFDLYGEkEPWEIWDlhggfNL-QSDEDLYFFTKLKKKSQNGSRINRSVGTGTWMGE 92 68************.8888888888866777778******96449*999633454333.357899**************************** PP NAM 87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+++s+ + g k+ + + g p+ + +W+mhey+l Thecc1EG044633t1 93 DSGKPIYSRlsAIQPLGFKRRFRYE-GGVPQ-QVGQWIMHEYSL 134 ********9766777********97.55555.589*******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 27.681 | 1 | 154 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.02E-26 | 2 | 153 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.6E-14 | 3 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
MFVGFGFEPS DRSLMCYLFS KVTSKSMLHL DQVQIKDFDL YGEKEPWEIW DLHGGFNLQS 60 DEDLYFFTKL KKKSQNGSRI NRSVGTGTWM GEDSGKPIYS RLSAIQPLGF KRRFRYEGGV 120 PQQVGQWIMH EYSLNTTLVP ENDQGYVLCR VRKNDREEKK AEKRRKLIT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 166 | RKNDREEKKAEKRRKL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017984347.1 | 1e-124 | PREDICTED: NAC domain-containing protein 101 | ||||
TrEMBL | A0A061FR05 | 1e-123 | A0A061FR05_THECC; Transcription factor-like protein | ||||
STRING | EOY19511 | 1e-124 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 9e-20 | NAC 007 |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG044633t1 |
Entrez Gene | 18587000 |
Publications ? help Back to Top | |||
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