PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG042034t5 | ||||||||
Common Name | TCM_042034 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | bZIP | ||||||||
Protein Properties | Length: 267aa MW: 30039.9 Da PI: 9.6536 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.4 | 1.4e-12 | 197 | 240 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r rrk+kNRe+A rsR+RK+a+ eL kv Le+eN +Lkke Thecc1EG042034t5 197 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENIKLKKE 240 688***************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-8 | 193 | 249 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.795 | 195 | 240 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.68E-14 | 197 | 234 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.6E-12 | 197 | 241 | No hit | No description |
Pfam | PF00170 | 1.2E-10 | 197 | 240 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.0E-10 | 197 | 242 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 200 | 215 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence Send to blast |
MGIQTMGSQS NGQQSHLQPS PLVRQNSWYS LTLNEVENQL GMLGKPLGSM NLDELLDNVW 60 TTESNQSLGI DTESTSPSSS LQRQASLTLA RAFSGKTVDQ VWKEIQQGQK KRFGEEMKGQ 120 EREPTLGEMT LEDFLVQAGL FVADTSLGPT MELDSTPQSF LPQIGLSPTP LLGTLSDTSM 180 KGRKRDSQDA FEKTIERRLR RKIKNRESAA RSRARKQAYH NELVSKVSRL EEENIKLKKE 240 KKFEKIFHCE TPDPKYQLRR TSSASF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KC008713 | 9e-40 | KC008713.1 Camellia sinensis bZIP transcription factor family protein 3 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007016702.2 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Swissprot | Q9LES3 | 5e-70 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A061H081 | 0.0 | A0A061H081_THECC; ABA-responsive element binding protein 3 isoform 1 | ||||
STRING | EOY34324 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 7e-61 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG042034t5 |
Entrez Gene | 18590858 |
Publications ? help Back to Top | |||
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