PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG022516t3
Common NameTCM_022516
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 595aa    MW: 66062.1 Da    PI: 8.1724
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG022516t3genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.41.1e-06243300158
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                       eke +r rr   NRe+Ar   +R++a +e+L+ kv+ L+ eN+ Lk   e   ke+++
  Thecc1EG022516t3 243 EKEARRLRRILANRESARQTIRRRQALCEKLTLKVADLTRENENLKRAKELALKEYKS 300
                       799******************************************9544444455555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-6243307IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.714245308IPR004827Basic-leucine zipper domain
CDDcd147021.90E-12248298No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MDLERGLASS SLASTPGEAA EGAEAVTADQ MEMEAAEILA ALAHSKKRDA VAVAAKFSAK  60
WGCKGKRVSR RVSSSESPPS EIGLNQVDPV QSSSDLAEDR AAVDQQQSQV TSTPVVIESI  120
EAEQNSELLN GSHTCAARYT SKCVGKSRQN AEKETLRLHR MLTNKESDWQ MIRERQILYS  180
IMGMPEKDVW EDRQHDQMTG NDVLIKSVKA EQNAESVKSS PTCATKYMSG GGGRSRQNLT  240
EAEKEARRLR RILANRESAR QTIRRRQALC EKLTLKVADL TRENENLKRA KELALKEYKS  300
QESTNKHLKA QMVKAIKAEE GEAPRELKLA HQISGPSRNY PFYFYNQHPF PPFCWPSIVQ  360
SSNPVQTQCE HQNAIVVSSS ISAPTNGRLD SSHDQENPIN VNGPKTPLYV VPYPWFFSLP  420
DHGNELHLRP CCGPKNNKDE TSANNRFSAG CSLKSVVHEE KYNFSLPTEV EKEAYGSIEA  480
SSNNQNCTSV RLPSDGSVQC IRYQIKEEVI LPTPLCSAGP TFVVEQENTP DVNTEAARVR  540
ACHFVGALPE ENQESTNYTT KKVLDAAAAA EARKRRKELT KLKNLHGRQC RTHR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1572577RKRRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007027676.20.0PREDICTED: uncharacterized protein LOC18598196 isoform X3
TrEMBLA0A061ET430.0A0A061ET43_THECC; Basic-leucine zipper transcription factor family protein, putative isoform 3
STRINGEOY081780.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.16e-56bZIP family protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]