PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG022516t3 | ||||||||
Common Name | TCM_022516 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | bZIP | ||||||||
Protein Properties | Length: 595aa MW: 66062.1 Da PI: 8.1724 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 20.4 | 1.1e-06 | 243 | 300 | 1 | 58 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 eke +r rr NRe+Ar +R++a +e+L+ kv+ L+ eN+ Lk e ke+++ Thecc1EG022516t3 243 EKEARRLRRILANRESARQTIRRRQALCEKLTLKVADLTRENENLKRAKELALKEYKS 300 799******************************************9544444455555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-6 | 243 | 307 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.714 | 245 | 308 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.90E-12 | 248 | 298 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 595 aa Download sequence Send to blast |
MDLERGLASS SLASTPGEAA EGAEAVTADQ MEMEAAEILA ALAHSKKRDA VAVAAKFSAK 60 WGCKGKRVSR RVSSSESPPS EIGLNQVDPV QSSSDLAEDR AAVDQQQSQV TSTPVVIESI 120 EAEQNSELLN GSHTCAARYT SKCVGKSRQN AEKETLRLHR MLTNKESDWQ MIRERQILYS 180 IMGMPEKDVW EDRQHDQMTG NDVLIKSVKA EQNAESVKSS PTCATKYMSG GGGRSRQNLT 240 EAEKEARRLR RILANRESAR QTIRRRQALC EKLTLKVADL TRENENLKRA KELALKEYKS 300 QESTNKHLKA QMVKAIKAEE GEAPRELKLA HQISGPSRNY PFYFYNQHPF PPFCWPSIVQ 360 SSNPVQTQCE HQNAIVVSSS ISAPTNGRLD SSHDQENPIN VNGPKTPLYV VPYPWFFSLP 420 DHGNELHLRP CCGPKNNKDE TSANNRFSAG CSLKSVVHEE KYNFSLPTEV EKEAYGSIEA 480 SSNNQNCTSV RLPSDGSVQC IRYQIKEEVI LPTPLCSAGP TFVVEQENTP DVNTEAARVR 540 ACHFVGALPE ENQESTNYTT KKVLDAAAAA EARKRRKELT KLKNLHGRQC RTHR* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 572 | 577 | RKRRKE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007027676.2 | 0.0 | PREDICTED: uncharacterized protein LOC18598196 isoform X3 | ||||
TrEMBL | A0A061ET43 | 0.0 | A0A061ET43_THECC; Basic-leucine zipper transcription factor family protein, putative isoform 3 | ||||
STRING | EOY08178 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 6e-56 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG022516t3 |
Entrez Gene | 18598196 |
Publications ? help Back to Top | |||
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