PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG022516t1 | ||||||||
Common Name | TCM_022516 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | bZIP | ||||||||
Protein Properties | Length: 596aa MW: 66190.2 Da PI: 8.1724 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 20.4 | 1.1e-06 | 244 | 301 | 1 | 58 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 eke +r rr NRe+Ar +R++a +e+L+ kv+ L+ eN+ Lk e ke+++ Thecc1EG022516t1 244 EKEARRLRRILANRESARQTIRRRQALCEKLTLKVADLTRENENLKRAKELALKEYKS 301 799******************************************9544444455555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-6 | 244 | 308 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.714 | 246 | 309 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.08E-12 | 249 | 299 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 596 aa Download sequence Send to blast |
MDLERGLASS SLASTPGEAA EGAEAVTADQ MEMEAAEILA ALAHSKKRDA VAVAAKFSAK 60 WGCKGKRVSR RVSSSESPPS EIGLNQVDPV QSSSDLAEQD RAAVDQQQSQ VTSTPVVIES 120 IEAEQNSELL NGSHTCAARY TSKCVGKSRQ NAEKETLRLH RMLTNKESDW QMIRERQILY 180 SIMGMPEKDV WEDRQHDQMT GNDVLIKSVK AEQNAESVKS SPTCATKYMS GGGGRSRQNL 240 TEAEKEARRL RRILANRESA RQTIRRRQAL CEKLTLKVAD LTRENENLKR AKELALKEYK 300 SQESTNKHLK AQMVKAIKAE EGEAPRELKL AHQISGPSRN YPFYFYNQHP FPPFCWPSIV 360 QSSNPVQTQC EHQNAIVVSS SISAPTNGRL DSSHDQENPI NVNGPKTPLY VVPYPWFFSL 420 PDHGNELHLR PCCGPKNNKD ETSANNRFSA GCSLKSVVHE EKYNFSLPTE VEKEAYGSIE 480 ASSNNQNCTS VRLPSDGSVQ CIRYQIKEEV ILPTPLCSAG PTFVVEQENT PDVNTEAARV 540 RACHFVGALP EENQESTNYT TKKVLDAAAA AEARKRRKEL TKLKNLHGRQ CRTHR* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 573 | 578 | RKRRKE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007027676.2 | 0.0 | PREDICTED: uncharacterized protein LOC18598196 isoform X3 | ||||
TrEMBL | A0A061EU76 | 0.0 | A0A061EU76_THECC; Basic-leucine zipper transcription factor family protein, putative isoform 1 | ||||
STRING | EOY08178 | 0.0 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM11211 | 24 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 8e-56 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG022516t1 |
Entrez Gene | 18598196 |
Publications ? help Back to Top | |||
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