PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Thecc1EG021629t1 | ||||||||
Common Name | TCM_021629 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 201aa MW: 23249.6 Da PI: 9.6459 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.4 | 6.5e-08 | 105 | 158 | 10 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + NR++A++sR+R+ ++ie+L + +++ +a+ +L+ +++ +k a l++e+ Thecc1EG021629t1 105 LLANRVSAQKSRLRRMEYIEKLNKDIETEQAKIAELAPQVSYYKHRRAMLQKEN 158 567*****************************9999999999999999888876 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.9E-4 | 99 | 160 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.73E-8 | 102 | 152 | No hit | No description |
CDD | cd14703 | 3.03E-13 | 103 | 152 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-8 | 105 | 155 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 201 aa Download sequence Send to blast |
MPPKDQTSPN PEQMISPEGS NPPSSLDIVE LTSSLQATEP RRAISLHKRS ASDSLVILRK 60 PYLVGQSSSS LVTETQKWGR SFEPTMDPKK MKRWTYLHTH TMKLLLANRV SAQKSRLRRM 120 EYIEKLNKDI ETEQAKIAEL APQVSYYKHR RAMLQKENDE IKQKIEFLEK EEARKEAEYQ 180 ALKDERDMLA LTYFLQQEGL * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_017976242.1 | 1e-124 | PREDICTED: basic leucine zipper 19 | ||||
TrEMBL | A0A061EXY5 | 1e-144 | A0A061EXY5_THECC; Uncharacterized protein | ||||
STRING | EOY07119 | 1e-145 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM18651 | 6 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-17 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Thecc1EG021629t1 |
Entrez Gene | 18597486 |
Publications ? help Back to Top | |||
---|---|---|---|
|