PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG019998t1 | ||||||||
Common Name | TCM_019998 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | bZIP | ||||||||
Protein Properties | Length: 413aa MW: 44764.8 Da PI: 6.5196 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.4 | 4.1e-10 | 215 | 273 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l++e+ Thecc1EG019998t1 215 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAEN 273 9*********************************************9998888777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.8E-16 | 211 | 275 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.932 | 213 | 276 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.85E-11 | 215 | 266 | No hit | No description |
Pfam | PF00170 | 9.6E-9 | 215 | 269 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-10 | 215 | 269 | No hit | No description |
CDD | cd14703 | 1.50E-24 | 216 | 265 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 413 aa Download sequence Send to blast |
MEKDKTPGLP PPSGRFSGFS SGGNAPNTFN VKSETGSFGQ TSEPNRFSHD VSKMPDNPPK 60 NLGHRRAHSE ILTLPDDISF DSDLGVVGAA DGPSYSDETE EDLLSMYLDM DKFNSSSATS 120 AFQVGESSVA APAAAPVPAV GVGVGTGMLA GENVSVGVGS SEKPRVRHQH SQSMDGSTSI 180 KPEMLMSGSE EVSPADSKKA ISAAKLAELA LIDPKRAKRI WANRQSAARS KERKMRYIAE 240 LERKVQTLQT EATSLSAQLT LLQRDTNGLT AENSELKLRL QTMEQQVHLQ DALNDALKEE 300 IQHLKVLTGQ SMPNGGPMMN FTSFGASQQY YPNNPAMHTL LTAQQFQQLQ INSKKHQHQF 360 QQHQLHQLQQ QQLQQQQEQP QQQSGEIKAR GSMPSPSQKD GSLDVSSTAS KD* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00126 | DAP | Transfer from AT1G06070 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007033903.2 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 1e-156 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A061ER89 | 0.0 | A0A061ER89_THECC; Basic-leucine zipper transcription factor family protein | ||||
STRING | EOY04829 | 0.0 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2445 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-160 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG019998t1 |
Entrez Gene | 18602453 |
Publications ? help Back to Top | |||
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