PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG011857t2 | ||||||||
Common Name | TCM_011857 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | G2-like | ||||||||
Protein Properties | Length: 279aa MW: 30950.3 Da PI: 6.864 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.7 | 6.4e-29 | 222 | 272 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQ Thecc1EG011857t2 222 KQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQ 272 79************************************************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.97 | 219 | 278 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 6.6E-24 | 220 | 272 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.78E-14 | 220 | 273 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.8E-24 | 222 | 273 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.4E-6 | 224 | 272 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence Send to blast |
MINMDYAKKM RRCHEYVEAL EEERRKIQVF QRELPLCLEL VTQAIEACKK EISGGSTTTD 60 YMQGQSECSE QTSSDGPVLE EFIPIKRSSD CSEEDDEQES RKSKDHDTNT KEKNVAAADK 120 KKSDWLRSVQ LWNNNQSPDP PLQEGAGKSG SAVEVKRNGG AFQPFHREKT VEKSVPSVGK 180 ANASATSTST TESGSRGGGG GEANNGNTNS KKEEKEGQPQ RKQRRCWSPE LHRRFLHALQ 240 QLGGSHVATP KQIRELMKVD GLTNDEVKSH LQVCSTEI* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00160 | DAP | Transfer from AT1G25550 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007046296.1 | 0.0 | PREDICTED: myb family transcription factor EFM | ||||
Swissprot | Q9FPE8 | 8e-98 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A061EIK5 | 0.0 | A0A061EIK5_THECC; Myb-like transcription factor family protein, putative isoform 2 | ||||
STRING | EOY02128 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 3e-89 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG011857t2 |
Entrez Gene | 18610532 |
Publications ? help Back to Top | |||
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