PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG011845t1 | ||||||||
Common Name | TCM_011845 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | bZIP | ||||||||
Protein Properties | Length: 463aa MW: 50732.7 Da PI: 5.9555 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.1 | 5.1e-10 | 174 | 212 | 5 | 43 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 k rr+++NReAAr+sR+RKka++++Le+ L++ + Thecc1EG011845t1 174 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLTQLEQ 212 788*************************97666655554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-7 | 167 | 217 | No hit | No description |
SMART | SM00338 | 4.7E-9 | 170 | 241 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.415 | 172 | 216 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 9.8E-7 | 172 | 216 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 2.17E-25 | 174 | 226 | No hit | No description |
SuperFamily | SSF57959 | 9.64E-7 | 174 | 217 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 177 | 192 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.4E-31 | 259 | 332 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009909 | Biological Process | regulation of flower development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 463 aa Download sequence Send to blast |
MQSFKAAAPT NPDMFCHTSF FLRGEDCNSR HQTRFSDLGE LDHPASAFQH DDAVDLSPSS 60 IFSLKSSNVA VVANSFNYGS LNTSIGATEI VSSGTGCLDT GQFMYQKGTT FGASLGNGHI 120 ENWADSGLAD NSQQTDTSTD VDNDDKNQLN GVRHGAIITV DSVDESKPKT GDQKTLRRLA 180 QNREAARKSR LRKKAYVQQL ENSRLRLTQL EQELQRARQQ GIFISSGLSG DHGHSVAGNG 240 ALAFDMDYAH WLDDHQRLIN DLRSAVNSHM GDNELRILVE GVMAHYDEVF RLKSIGAKAD 300 VFHMLSGMWK TPAERCFMWL GGFRSSELLK ILGNHLEPLT DQQLMGICNL QQSSQQAEDA 360 LSQGMEALQQ SLVDTLSSAC LGPAGSGNVA DYMGQMAIAM GKLATLENFL HQADLLRQQT 420 LQQMHRILTT RQAARALLVI SDYTSRLRAL SSLWCLEGDG EA* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the determination of floral organ number. Acts to determine floral organ patterning by establishing floral organ primordia in specific numbers and positions. Plays a role in regulating stem cell fate by directly controlling AG expression. Binds to the 5'-AAGAAT-3' cis-acting element found in AG promoter. Might represent a target for a post-translational modification by GRXC7/ROXY1. {ECO:0000269|PubMed:19395638, ECO:0000269|PubMed:19395639, ECO:0000269|PubMed:9990857}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007046280.2 | 0.0 | PREDICTED: transcription factor HBP-1b(c38) isoform X1 | ||||
Swissprot | Q9SX27 | 0.0 | PAN_ARATH; Transcription factor PERIANTHIA | ||||
TrEMBL | A0A061ECH8 | 0.0 | A0A061ECH8_THECC; BZIP transcription factor family protein isoform 1 | ||||
STRING | EOY02112 | 0.0 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM667 | 28 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-175 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG011845t1 |
Entrez Gene | 18610523 |