PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG007292t1 | ||||||||
Common Name | TCM_007292 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | bZIP | ||||||||
Protein Properties | Length: 316aa MW: 35488.6 Da PI: 6.7273 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.8 | 7.4e-16 | 229 | 289 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +l+++rr+q NRe+A+rsR+RK++e e+Le ++++L++e +aL +el++ ++e+ +l e+ Thecc1EG007292t1 229 DLRKQRRRQLNRESAKRSRLRKQQEREKLEARIEVLKGESSALCEELNRVSEECGRLYEEN 289 589***************************************************9998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-12 | 223 | 285 | No hit | No description |
SMART | SM00338 | 6.0E-11 | 227 | 291 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.507 | 229 | 292 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.1E-13 | 230 | 289 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.87E-9 | 230 | 286 | No hit | No description |
CDD | cd14702 | 1.20E-16 | 232 | 282 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010310 | Biological Process | regulation of hydrogen peroxide metabolic process | ||||
GO:0090342 | Biological Process | regulation of cell aging | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence Send to blast |
MGTEDRNSIA KSKPPKQKDS REVRRLAKSH KDKETSAAPA PFPAPHWLNS VQIQYTQDGF 60 SLPNSQLHYL PQLMQPNPIP QFYPGFYHMK SPHAYFNAVG DSMLPISEKG KDIPREKDLD 120 SGRSKDEGTS YRNHTHDPSR REVLYQTLIA NFSFNSAASG DEASPDGRDD ANQDLSATKK 180 QRLNQTKADD YIMVDGSASD VLEPALNLAI SNSSAGSIST TAKISDVYDL RKQRRRQLNR 240 ESAKRSRLRK QQEREKLEAR IEVLKGESSA LCEELNRVSE ECGRLYEENK LIMEELIPMC 300 GPDDDLAALW AELHA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017971892.1 | 0.0 | PREDICTED: G-box-binding factor 1 isoform X2 | ||||
TrEMBL | A0A061E1Q5 | 0.0 | A0A061E1Q5_THECC; Uncharacterized protein isoform 1 | ||||
STRING | EOX98567 | 0.0 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7274 | 26 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.1 | 1e-20 | G-box binding factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG007292t1 |
Entrez Gene | 18608145 |
Publications ? help Back to Top | |||
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