PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG004222t1 | ||||||||
Common Name | TCM_004222 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | bZIP | ||||||||
Protein Properties | Length: 455aa MW: 48700.9 Da PI: 5.6464 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.1 | 2.2e-14 | 218 | 273 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr+rr+ +NRe+ArrsR+RK+a + Le v +L e ++L k+l ++ ++++ Thecc1EG004222t1 218 DAKRARRMRSNRESARRSRRRKQAHMNDLEAQVGQLRVEHSTLLKRLTDMNHKYDE 273 68******************************************888877777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.4E-11 | 215 | 270 | No hit | No description |
SMART | SM00338 | 1.3E-17 | 216 | 280 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.898 | 218 | 273 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.2E-12 | 219 | 272 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.55E-10 | 220 | 270 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 223 | 238 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 7.0E-31 | 287 | 406 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0002240 | Biological Process | response to molecule of oomycetes origin | ||||
GO:0009626 | Biological Process | plant-type hypersensitive response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000693 | Biological Process | positive regulation of seed maturation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence Send to blast |
MNTVFSVDDF SDPFWATPAL EAAAGMSRSQ SEWALQKFLE EFSGAGGATP GSRAGENVIG 60 PCLAAPQPSV SKAEEGDGDS DVVEIKRSNN QNHHPPPSDP TPTVPIDSDE YREILKNKLD 120 QACAAVALSR ASAVKAEDSS AQAEDRALQS GSQVQGSSKA QGQGEPDDAP CGTQAVLTTQ 180 RKSGVQARQT TSGSSREDSD DDELEGDTET TENMDPADAK RARRMRSNRE SARRSRRRKQ 240 AHMNDLEAQV GQLRVEHSTL LKRLTDMNHK YDEAAVDNRI LKADIETLRA KVKMAEETVK 300 RVTGINPVLL SRPNVPSVGM PFVSSPLEAS TAAPVPLQPN TNQFFQQPVP SIAAPMHHQG 360 VDNSFRGNTP VPPIVNPQTE VGVNNVNETS ALQHTPSLER VQDQIAHSGM QKQIGPGVSP 420 CGSMPGWEPG LAHAAAKNWE PGLAHAAAKN KKQS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 232 | 239 | RRSRRRKQ |
2 | 234 | 239 | SRRRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007050435.1 | 0.0 | PREDICTED: light-inducible protein CPRF2 | ||||
TrEMBL | A0A061DQA6 | 0.0 | A0A061DQA6_THECC; BZIP transcription factor family protein, putative isoform 1 | ||||
STRING | EOX94593 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02640.2 | 3e-52 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG004222t1 |
Entrez Gene | 18613244 |
Publications ? help Back to Top | |||
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