PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_7DS_E98DB84F1.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 84aa MW: 9721.19 Da PI: 9.358 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 22.2 | 4.5e-07 | 2 | 64 | 2 | 74 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdg 74 f n Y+ e GF +r k++ + +++ t+++ vC ++gk+ +e+++ + r++C a++++ + +d+ Traes_7DS_E98DB84F1.1 2 FLNLYSWEHGFGIRYGKNRLN-PDRRKTMQEIVCGCSGKPLRENTR---------SCRCECPAMIRLLRASDN 64 8899*************9998.6666899**********9987655.........99********99887654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence Send to blast |
RFLNLYSWEH GFGIRYGKNR LNPDRRKTMQ EIVCGCSGKP LRENTRSCRC ECPAMIRLLR 60 ASDNGYPDLH LTDKAYTGSI WLLG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020198214.1 | 3e-34 | protein FAR1-RELATED SEQUENCE 11-like isoform X2 | ||||
TrEMBL | A0A452XIY2 | 9e-29 | A0A452XIY2_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A452XJ32 | 2e-28 | A0A452XJ32_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A453G8B5 | 2e-28 | A0A453G8B5_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A453Q400 | 4e-29 | A0A453Q400_AEGTS; Uncharacterized protein | ||||
STRING | Traes_7DS_E98DB84F1.1 | 4e-57 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP619 | 19 | 91 |
Publications ? help Back to Top | |||
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