PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_7DL_C39412827.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 527aa MW: 58802.5 Da PI: 4.6875

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_7DL_C39412827.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	50.4	5e-16	90	140	5	55
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQkYRl 55 W++eLHe+F++ave LG A ++i + m+ k+ Lt++hv+SHLQk+Rl Traes_7DL_C39412827.1 90 LWSSELHEKFLQAVEVLGA--SAMAQNIHQYMNAKDlnLTIQHVASHLQKHRL 140 5**************54..47889****973369**********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.14E-10	89	144	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.2E-15	90	144	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.5E-13	91	141	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence Send to blast
MDTLVLFHHI LNALKVPLIT MCAYDEAVST RLTLGTCFNV VKPLDTETVN FLRMRALQHR 60 SIKNHRSETE DEKQDALNAN VYSENLGWFL WSSELHEKFL QAVEVLGASA MAQNIHQYMN 120 AKDLNLTIQH VASHLQKHRL RAQRQRLSHD EEGYQHYARM KELSEMMSSA YKAPSAKPNN 180 HLATTQTQFT HGVASSIWDK YPGMVWPHME GSSAASAMWY SYPGKRWGQV GESSAGARVS 240 QTNARPPPVL IHGTKSIWDW YQESLQHYNE SLSYKREVLP VQSKALDGYG REIFINLERE 300 EISLTETAGK IVINLESDDM QKDTNDDVHA AVTPQEDTMN EVHAAVTLQK DTMDEAHAAV 360 TPHEVNEVPA AAMGAGYLVD LAGNALLDGI DNYHPAAENA QSEPFSDWDW KEVEKFLTNQ 420 MEGQGQEQQG LELVDLLQVD GISPEELLQV DEAWNQALQQ ANPANVVEDE PMAEEPAAGD 480 APVSDPANQS GVADNVFGVW SPQFAATTTA CRSRPARRGA TQELLLF

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence Send to blast

MDTLVLFHHI LNALKVPLIT MCAYDEAVST RLTLGTCFNV VKPLDTETVN FLRMRALQHR  60
SIKNHRSETE DEKQDALNAN VYSENLGWFL WSSELHEKFL QAVEVLGASA MAQNIHQYMN  120
AKDLNLTIQH VASHLQKHRL RAQRQRLSHD EEGYQHYARM KELSEMMSSA YKAPSAKPNN  180
HLATTQTQFT HGVASSIWDK YPGMVWPHME GSSAASAMWY SYPGKRWGQV GESSAGARVS  240
QTNARPPPVL IHGTKSIWDW YQESLQHYNE SLSYKREVLP VQSKALDGYG REIFINLERE  300
EISLTETAGK IVINLESDDM QKDTNDDVHA AVTPQEDTMN EVHAAVTLQK DTMDEAHAAV  360
TPHEVNEVPA AAMGAGYLVD LAGNALLDGI DNYHPAAENA QSEPFSDWDW KEVEKFLTNQ  420
MEGQGQEQQG LELVDLLQVD GISPEELLQV DEAWNQALQQ ANPANVVEDE PMAEEPAAGD  480
APVSDPANQS GVADNVFGVW SPQFAATTTA CRSRPARRGA TQELLLF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020157240.1	0.0	uncharacterized protein LOC109742553
TrEMBL	R7W6Z9	0.0	R7W6Z9_AEGTA; Putative two-component response regulator ARR20
STRING	EMT12774	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13017	19	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	8e-08	response regulator 12