PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_7DL_A8C4FFABB.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 299aa MW: 32324.7 Da PI: 11.2246

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_7DL_A8C4FFABB.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68.2	2.3e-21	98	158	70	128
NAM 70 tgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +r+ r+t++g+Wkatg+d++v ++ ++lvglkktLv+y+grap+g+ktdWvm+eyrl Traes_7DL_A8C4FFABB.1 98 RCRRRXRTTERGFWKATGSDRAVRCAadPKRLVGLKKTLVYYQGRAPRGTKTDWVMNEYRL 158 45688899**************98777788*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	25.07	18	180	IPR003441	NAC domain
SuperFamily	SSF101941	7.59E-25	95	180	IPR003441	NAC domain
Pfam	PF02365	1.2E-9	102	158	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence Send to blast
LADLSHGAAR RSGGAVAGAA GVPLPPHGGG AAGVLPQAPC HPKQQAAAPQ GGAVRHHPHG 60 APVPARPLGP PGARRHRQRA RVVLLRAPRR RPEARVRRCR RRXRTTERGF WKATGSDRAV 120 RCAADPKRLV GLKKTLVYYQ GRAPRGTKTD WVMNEYRLPD LSGAGAGEQQ DVVLCKVYRK 180 AVSLKELEQR VAMEELARAR SSPPTTASHS HSHSHCSAGS PDVSSASELA HEAALHHVHH 240 GVKKEEAVAV ARPPAMRQLE TAKANGGLEW MQDPFLTQLR SPWMEGLCLS PYYASVLNF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	7e-16	101	183	88	168	NO APICAL MERISTEM PROTEIN
1ut4_B	7e-16	101	183	88	168	NO APICAL MERISTEM PROTEIN
1ut7_A	7e-16	101	183	88	168	NO APICAL MERISTEM PROTEIN
1ut7_B	7e-16	101	183	88	168	NO APICAL MERISTEM PROTEIN
3swm_A	8e-16	101	183	91	171	NAC domain-containing protein 19
3swm_B	8e-16	101	183	91	171	NAC domain-containing protein 19
3swm_C	8e-16	101	183	91	171	NAC domain-containing protein 19
3swm_D	8e-16	101	183	91	171	NAC domain-containing protein 19
3swp_A	8e-16	101	183	91	171	NAC domain-containing protein 19
3swp_B	8e-16	101	183	91	171	NAC domain-containing protein 19
3swp_C	8e-16	101	183	91	171	NAC domain-containing protein 19
3swp_D	8e-16	101	183	91	171	NAC domain-containing protein 19
4dul_A	7e-16	101	183	88	168	NAC domain-containing protein 19
4dul_B	7e-16	101	183	88	168	NAC domain-containing protein 19
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU967633	1e-116	EU967633.1 Zea mays clone 304978 mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020175218.1	1e-130	NAC domain-containing protein 35-like
Swissprot	Q10S65	3e-57	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A3B6TTD8	1e-129	A0A3B6TTD8_WHEAT; Uncharacterized protein
TrEMBL	A0A453TB03	1e-129	A0A453TB03_AEGTS; Uncharacterized protein
STRING	Traes_7DL_A8C4FFABB.1	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	7e-33	NAC domain containing protein 36

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]