PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DL_976FAF094.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 347aa    MW: 36960.4 Da    PI: 7.5021
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DL_976FAF094.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.13.5e-32156209255
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Traes_7DL_976FAF094.1 156 PRMRWTSSLHSRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 209
                            9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.36E-15153210IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.7E-29154210IPR009057Homeodomain-like
TIGRFAMsTIGR015576.2E-24156209IPR006447Myb domain, plants
PfamPF002494.9E-7157208IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MELFPSQPDL SLQIGLPASA APLGHDHHRA IGGRFFGPPS NSNIGGNPAM AASLQLPFPM  60
PPMPLPPHHA GAPGHGGLYY HHHPVPDGAM LRPIRGVPLY PTPFPPPPPH GGPSAAATAP  120
CYCDPCHVAG AWRRGVGGCG ARLVGFPAPK RTARAPRMRW TSSLHSRFVH AVELLGGHER  180
ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KNTERPAASS DQADGFENGS SGEICDDNLL  240
DLRGGGRPEA VAAATRNGRF AANDDDRSIG AGATHGGALW NSSSREEDWS GFPCDSNNES  300
MQSFKDHMQS KSLEILSDMN SCLSETTSSA SAPNLDFTLG RPHQRRS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-17157211357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-17157211357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-17157211357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-17157211357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0956895e-82FP095689.1 Phyllostachys edulis cDNA clone: bphylf026d19, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178603.10.0probable transcription factor KAN2
TrEMBLA0A453RX080.0A0A453RX08_AEGTS; Uncharacterized protein
STRINGTraes_7DL_976FAF094.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47213665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.12e-46G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]