PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_7BL_F09405E3E.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 131aa MW: 15214.6 Da PI: 10.3082 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 127.3 | 1.2e-39 | 2 | 94 | 35 | 128 |
NAM 35 kevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWv 122 +vd++k+ePwdLp+ + + kewyf+s rd+kyatg+r+nrat+sgyWkatgkd+++ + kg lvg++ktLvfy+grapkg+kt+Wv Traes_7BL_F09405E3E.1 2 VDVDLNKIEPWDLPEIACIGGKEWYFYSLRDRKYATGQRTNRATESGYWKATGKDRSISR-KGLLVGMRKTLVFYQGRAPKGKKTEWV 88 689***********7666789*************************************99.999************************ PP NAM 123 mheyrl 128 mhe+r Traes_7BL_F09405E3E.1 89 MHEFRK 94 ****96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 45.055 | 1 | 117 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.72E-47 | 2 | 117 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-15 | 15 | 93 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MVDVDLNKIE PWDLPEIACI GGKEWYFYSL RDRKYATGQR TNRATESGYW KATGKDRSIS 60 RKGLLVGMRK TLVFYQGRAP KGKKTEWVMH EFRKEGQGDL MKLPLKEDWV LCRVFYKTRA 120 TVAKPPTGSS Y |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-38 | 1 | 124 | 49 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-38 | 1 | 124 | 49 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-38 | 1 | 124 | 49 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-38 | 1 | 124 | 49 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-38 | 1 | 124 | 52 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-38 | 1 | 124 | 52 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-38 | 1 | 124 | 52 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-38 | 1 | 124 | 52 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-38 | 1 | 124 | 52 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-38 | 1 | 124 | 52 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-38 | 1 | 124 | 52 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-38 | 1 | 124 | 52 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-38 | 1 | 124 | 49 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-38 | 1 | 124 | 49 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by auxin. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK356223 | 1e-170 | AK356223.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1031L15. | |||
GenBank | HM027572 | 1e-170 | HM027572.1 Triticum aestivum NAC transcription factor 7 (NAC7) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020174529.1 | 6e-92 | NAC domain-containing protein 21/22-like | ||||
Swissprot | Q84TE6 | 2e-60 | NAC22_ARATH; NAC domain-containing protein 21/22 | ||||
TrEMBL | A0A3B6RLH7 | 2e-92 | A0A3B6RLH7_WHEAT; Uncharacterized protein | ||||
STRING | Traes_7AL_BE3253C8F.1 | 3e-93 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1012 | 37 | 138 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 7e-63 | NAC domain containing protein 1 |