PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7BL_C35CABF69.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 277aa    MW: 30715.4 Da    PI: 10.3631
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7BL_C35CABF69.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like986.5e-31107160255
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            prlrWtp+LH +F++ave+LGG+e+AtPk +l++m+v gL ++hvkSHLQ+YR+
  Traes_7BL_C35CABF69.1 107 PRLRWTPDLHMAFLHAVERLGGQERATPKLVLQMMNVRGLNIAHVKSHLQMYRS 160
                            9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.449103163IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.1E-29103161IPR009057Homeodomain-like
SuperFamilySSF466891.97E-14105161IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-22107162IPR006447Myb domain, plants
PfamPF002494.0E-8108159IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MGEVKEKEAL AEILEDHRKG SSDDTLPPAG LDLNEGFSEA SDDGRDGDEN YDDDGGSTSE  60
VAGGGRSSSN NNSTNHESES SRGRHDKAEG SGERVPTVRQ YNRSKHPRLR WTPDLHMAFL  120
HAVERLGGQE RATPKLVLQM MNVRGLNIAH VKSHLQMYRS KKIEHESSHE RAAMSSVFSP  180
MNFHMRRGDH PFHDMFFQQR AAGSTLTSRF NDGGVFTPRN AGFPDASRIX XSNAGSLHYK  240
PSTSRTARAL GIKNGRSPST RRRRGHARLM TMVRGKG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-18108160456Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-18108160456Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-18108160355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-18108160355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-18108160355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-18108160355Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-18108160456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-18108160456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-18108160456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-18108160456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-18108160456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-18108160456Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0736061e-101AK073606.1 Oryza sativa Japonica Group cDNA clone:J033048N17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172017.11e-139uncharacterized protein LOC109757605
TrEMBLA0A3B6SLG61e-166A0A3B6SLG6_WHEAT; Uncharacterized protein
TrEMBLA0A446YK821e-166A0A446YK82_TRITD; Uncharacterized protein
STRINGTraes_7BL_C35CABF69.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-33G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]