PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7BL_9884A6FA5.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 70aa    MW: 8403.22 Da    PI: 5.861
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7BL_9884A6FA5.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1371.1e-112569145
                   FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeek 45
                           +fYn+YA e GFsvrks+ +    n+ i+ r+ +Cs++g+ree++
  Traes_7BL_9884A6FA5.1 25 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIMCSRQGFREEKH 69
                           6****************************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.9E-92569IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
ASDESMFEYX NVVSKMFDSE AEGYEFYNKY ALEKGFSVRK SYVEWDGSNK YIILRKIMCS  60
RQGFREEKHM
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-103HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020188780.13e-41protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A453A3Y51e-38A0A453A3Y5_AEGTS; Uncharacterized protein
TrEMBLA0A453JUJ92e-38A0A453JUJ9_AEGTS; Uncharacterized protein
STRINGTraes_5BS_48110DBF6.11e-43(Triticum aestivum)
STRINGTraes_7BL_9884A6FA5.12e-43(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2449976
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]