PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_7BL_0712EF0CA.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 253aa MW: 27938.1 Da PI: 4.691 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.3 | 5e-15 | 87 | 140 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++k +g+W A+I e + k ++lg+f t+ eAa+a++ a+ +l+g Traes_7BL_0712EF0CA.2 87 SSYRGVTRRK-DGKWQARIGRIGEsR--DtKDIYLGTFETEVEAAEAYDLAAIQLRG 140 67*****999.9******99953323..36**********99************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 10.257 | 1 | 52 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.4E-4 | 11 | 58 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.28E-7 | 14 | 52 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 6.7E-8 | 15 | 52 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.26E-23 | 87 | 150 | No hit | No description |
SuperFamily | SSF54171 | 1.57E-17 | 87 | 150 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.1E-10 | 87 | 140 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.3E-27 | 88 | 154 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.36 | 88 | 148 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.9E-19 | 88 | 148 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.1E-8 | 89 | 100 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.1E-8 | 130 | 150 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MFCMGSVSTF GCHCGSSVYL GSYVTEENAA RAHDLAALKY WGITQPTKLN FNISDYAKEI 60 EIMKSMNQDE FVAYIRRQSS CFSRGTSSYR GVTRRKDGKW QARIGRIGES RDTKDIYLGT 120 FETEVEAAEA YDLAAIQLRG VHAVTNFDIS NYSEEGLKKL EGSSEVVNLE DQSEVTKLAV 180 TNLDISKHCE DGLKKLDGAS QVVNLESQSE VTKLSVTNFD ISNCCEDGLK KLEGSSEVAN 240 LEDQSEVTKL AGQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | DQ286569 | 0.0 | DQ286569.1 Triticum aestivum aintegumenta-like protein (ANTL1A) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020150541.1 | 1e-174 | AP2-like ethylene-responsive transcription factor AIL1 | ||||
Swissprot | Q1PFE1 | 1e-52 | AIL1_ARATH; AP2-like ethylene-responsive transcription factor AIL1 | ||||
TrEMBL | A0A446YGW2 | 0.0 | A0A446YGW2_TRITD; Uncharacterized protein | ||||
STRING | Traes_7BL_0712EF0CA.2 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7864 | 35 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 6e-55 | AP2 family protein |
Publications ? help Back to Top | |||
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