PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AS_D145F9822.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 140aa    MW: 15474.6 Da    PI: 9.1531
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AS_D145F9822.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.11.4e-2291325128
                    NAM   5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                            +r +Ptd + v++yL + ++g++l++ +  i++v+i  +eP+dL +       +   ++ + +fF++ ++k+ ++ ++ ra+  g+W 
  Traes_7AS_D145F9822.1   9 YRLSPTDVDAVTYYLPRLLSGETLHAVDKlIHRVNISGCEPKDLAAryapvpqA--VSSGDRFFFTTCKSKNGSKLQSVRAAGGGTWT 94 
                            6899*******************7776666**************8535554322..244478*************************9 PP

                    NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                             + k++e+++  g +vg  k L f     +kg++t Wvm+eyr 
  Traes_7AS_D145F9822.1  95 IQ-KTTEIFH-AGVKVGEVKNLSFK----KKGKSTGWVMEEYRC 132
                            76.6689999.899**********8....78899********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.4615140IPR003441NAC domain
PfamPF023651.1E-139131IPR003441NAC domain
SuperFamilySSF1019415.62E-229136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
DVDDVFHHYR LSPTDVDAVT YYLPRLLSGE TLHAVDKLIH RVNISGCEPK DLAARYAPVP  60
QAVSSGDRFF FTTCKSKNGS KLQSVRAAGG GTWTIQKTTE IFHAGVKVGE VKNLSFKKKG  120
KSTGWVMEEY RCLLPEATVS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3732721e-141AK373272.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3025L12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197295.11e-93uncharacterized protein LOC109783104
TrEMBLA0A3B6RGF83e-98A0A3B6RGF8_WHEAT; Uncharacterized protein
TrEMBLA0A446X9763e-98A0A446X976_TRITD; Uncharacterized protein
STRINGTraes_7AS_D145F9822.11e-101(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-15NAC domain containing protein 58
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]