PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_7AS_7D1B721BD.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 81aa MW: 8926.24 Da PI: 6.5083 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 32.6 | 2.3e-10 | 53 | 80 | 1 | 28 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkl 28 +ppGfrFhPt+eel+++yL+kkv+++++ Traes_7AS_7D1B721BD.1 53 VPPGFRFHPTEEELLTYYLAKKVASQRI 80 69*********************99875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.14E-10 | 47 | 79 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 14.501 | 53 | 81 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.9E-7 | 54 | 77 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence Send to blast |
LPIVGALHSG YSSVLFTLLF LVDPSISLTD RVEHTTHAKE GIMSISVNGQ SVVPPGFRFH 60 PTEEELLTYY LAKKVASQRI D |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK367801 | 5e-51 | AK367801.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2062J03. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Traes_7AS_7D1B721BD.1 | 2e-52 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP16506 | 9 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32770.1 | 3e-17 | NAC domain containing protein 12 |
Publications ? help Back to Top | |||
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